Stenotrophomonas pavanii: STNY_R10700
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Entry
STNY_R10700 CDS
T07567
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaq03019
]
STNY_R10700 (rapZ)
Messenger RNA biogenesis [BR:
spaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
STNY_R10700 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_22
Zeta_toxin
AAA_16
T2SSE
Motif
Other DBs
NCBI-ProteinID:
BCX42890
LinkDB
All DBs
Position
complement(1156974..1157858)
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AA seq
294 aa
AA seq
DB search
MSTAPPTAPTLIIVSGLSGSGKSVALKTFEDQDYYCSDNLPIQLLPDFVRSLLANHDGSA
PRRLAVGIDIRGQADLSQLGNWRQLATDAGVEVKVLFFEASDEAVLKRYADTRRRHPLSQ
LRLSLPEAIARERELTAPLRREADAVIDTSHLNVHQLRRRIITEFAMGHATGLSLLFESF
AYKRGVPAEADFVFDARVLPNPHWDPDLRALSGREPGVRDYLEAQPDVQRYLAQLMDFLD
TWLPKLGDGTRSYVTVAFGCTGGKHRSVYLAERMARHAREKGWEDVATYHREQD
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcaccccctaccgccccgaccctgatcatcgtcagtggcctgtccggctcg
ggtaaatccgtcgccctgaagaccttcgaagaccaggactactactgctcggacaacctg
cccatccaactgctgccggacttcgtgcgcagcctgctggccaaccatgacggcagcgcg
ccgcgccggctggcggtaggcatcgacatccgcggccaggccgacctgagccaactgggc
aactggcggcagctggccaccgatgccggcgtggaagtgaaggtgctgttcttcgaagcc
agtgacgaggcggtgctcaagcgctacgccgacacccgtcgccgccatccactgagccag
ctgcggctgtcattgcccgaggccatcgcccgcgaacgcgaactgaccgcgccgctgcgc
cgtgaggccgatgcggtgatcgataccagccacctcaacgtgcaccagctgcggcggcgg
atcatcaccgagttcgcgatgggccatgccaccggcctgtcgctgctgttcgaatcgttc
gcctacaagcgcggcgtaccggccgaggcggacttcgtgttcgacgcgcgtgtgctgccc
aatccgcactgggacccggacctgcgcgcgctcagcggccgtgagcccggcgtgcgcgac
tacctggaggcacagccggacgtgcagcgctacctggcccagctgatggatttcctggat
acctggctgccgaaactgggcgatggcacgcgcagctacgtgaccgtggcgttcggctgc
accggcggcaagcatcgctcggtgtacctggccgagcgcatggcccggcatgcgcgcgag
aagggctgggaagacgtggccacgtaccaccgcgaacaggattga
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