Stenotrophomonas pavanii: STNY_R11100
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Entry
STNY_R11100 CDS
T07567
Name
(GenBank) TonB-dependent receptor
KO
K16090
catecholate siderophore receptor
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spaq02000
]
STNY_R11100
Transporters [BR:
spaq02000
]
Other transporters
Pores ion channels [TC:
1
]
STNY_R11100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BCX42930
LinkDB
All DBs
Position
complement(1191857..1194148)
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AA seq
763 aa
AA seq
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MTYITSRKHAPRVSLLATATLAAGFAPLAAQAADSADAGSRNATELDKVQVRGSWFNPSS
PKFTAELLDTPKSVSIVSEKLIAETGATNLQDALRMVPGITFGAGEGGNPTGDRPFIRGF
DSQSNVFVDGLRDVGSQTREIFDLEQVEVVKGPSSAYGGRDSGGGSLNLVSKTPKLKNET
SASMGIGTDSYARGTVDANYVLGDGIAARLNLMKHESDIAGRDAANVSRWGIAPSIAFGL
NGPAQLIASHYHMQSDDLPDAGGFPYGNPSGAPASKWVDGRPMVPDRNNYYGLVDRDFQR
TRADISTLDASYDFGGHKLRNIARLGNTSNDYLWTQPDDSQGNPNNYGTLWRRTNSRAVD
VKSFADQLGLTGAFQTGVLKHSYSAGVEYSDEKMTRGSYLMTPGTSNPLTGNSKCPTTGA
ATGYNCTDFANPDPRDPWAATHSVYRSNKALDVEQRTKTTSAYVFDTIELNEQWMVNLGL
RYDDFRTTLTTPVAGAAPTRVRNSNDFLNYQAGVVFKPAANGSIYLSWGTSSTPPGMDGG
DGSDGLSAAVADLKPQDTKNLELGTKWDLFDQRLNLTAAIFHTVMNNARVTVDNGTSQNA
GKKEINGFELGFTGQLTEAWSLYGGYTYLDSELKDNGFVCGAPVGRSCPSNVYVPSPYNG
NEFPNTAKHSANLWTTYRFPIGLTLGAGAFYSDKQYGDVANTKWIASYTRFDAMASYAIQ
DNISLQLNVQNLTDKTYFTKAYASHYASIAPGRSATLALNVKF
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgacctacatcacgtcccgcaagcacgccccgcgcgtttccctgctcgccaccgctacc
ctggctgcgggcttcgcgccgctggctgcgcaggctgccgacagcgccgacgccggctcc
cgcaacgccaccgagctggacaaggtgcaggtgcgcggcagctggttcaatccctcctcg
ccgaagttcaccgccgaactgctggacaccccgaagtcggtatcgatcgtgtcggagaag
ctgatcgccgaaaccggtgcgaccaacctgcaggatgcgctgcgcatggtgccgggcatc
accttcggcgccggcgaaggcggcaaccccaccggtgatcgccccttcatccgtggcttc
gattcgcagagcaacgtcttcgtcgacggcctgcgcgacgtcggttcgcagacccgcgaa
atcttcgacctggagcaggtggaagtggtcaagggcccgagctcggcctacggcggccgc
gattccggcggtggcagcctgaacctggtaagcaagacgccgaagctgaagaacgagacc
agcgccagcatgggcatcggtaccgacagctacgcgcgcggcaccgtggacgccaactac
gtgctgggcgatggcatcgccgcacgcctgaacctgatgaagcacgaatcggacatcgcc
ggccgcgacgccgccaacgtcagccgctggggcatcgcgccgtcgatcgcgttcggcctg
aacggcccggcgcagctgatcgccagccactaccacatgcagagcgacgacctgccggac
gccggtggcttcccgtacggcaacccgagcggtgcgccggcgtcgaagtgggtcgacggc
cgcccgatggtgccggaccgcaacaactactacggcctggtcgaccgtgatttccagcgc
acccgcgccgacatcagcaccctggatgccagctacgacttcggcggccacaagctgcgc
aacatcgcgcgcctgggcaacaccagcaacgactacctgtggacccagccggacgacagc
caaggcaacccgaacaactacggcaccttgtggcgccgtaccaacagccgtgccgtcgac
gtcaagagcttcgccgaccagctgggcctgaccggcgccttccagaccggcgtgctcaag
cacagctacagcgccggcgtggagtacagcgacgagaagatgacccgcggcagctacctg
atgaccccgggcaccagcaacccgctcaccggcaacagcaagtgcccgaccaccggcgcg
gccaccggctacaactgcaccgatttcgccaacccggacccgcgcgatccgtgggcggcc
acgcactcggtgtaccgcagcaacaaggcgctggacgtcgagcagcgcaccaagaccacc
tcggcctacgtgttcgacaccatcgagctcaatgagcagtggatggtcaacctcggcctg
cgctacgacgacttccgcaccaccctgaccactccggtggccggtgcggcgccgacccgc
gtgcgcaacagcaacgacttcctgaactaccaggccggcgtggtgttcaagccggctgcc
aacggcagcatctacctgtcgtggggcacctcctcgacgccgccgggcatggacgggggt
gatggttcggacggcctgagcgccgccgtggccgacctcaagccgcaggatacgaagaac
ctcgagctgggcaccaagtgggacctgttcgaccagcgcctgaacctcaccgcggcgatc
ttccacaccgtgatgaacaacgcgcgcgtgaccgtcgacaacggcaccagccagaacgcc
ggcaagaaggaaatcaacggcttcgagctcggcttcaccggccagctgaccgaggcctgg
agcctgtacggcggctacacctacctggactcggaactgaaggacaacggcttcgtctgt
ggcgcaccggtcggccgcagctgcccgtccaacgtctacgtgccctcgccgtacaacggc
aacgagttcccgaacaccgccaagcacagcgccaacctgtggaccacctaccgcttcccg
atcggcctgaccctcggcgccggtgcgttctactcggacaagcagtacggtgacgtcgcc
aacaccaagtggatcgccagctacacccgcttcgacgcgatggccagctacgcgatccag
gacaacatcagcctgcagctcaacgtgcagaacctgaccgacaagacctacttcaccaag
gcttatgcctcgcactacgcgagcatcgccccggggcgctcggccaccctggcactgaac
gtgaagttctga
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