Stenotrophomonas pavanii: STNY_R11180
Help
Entry
STNY_R11180 CDS
T07567
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00450
Selenocompound metabolism
spaq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
STNY_R11180
Enzymes [BR:
spaq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
STNY_R11180
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
STNY_R11180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BCX42938
LinkDB
All DBs
Position
complement(1203311..1204567)
Genome browser
AA seq
418 aa
AA seq
DB search
MNLSTPRPIEERTGAPDWDRVRLDFPLLMREVHGKPLVYFDNANTGQKPVQVIGAVDEFY
RRYNANVSRAVHALGSEATDAYEGARNTLARFLNVRPSELVLCSGTTFAINLVAYSWALP
RLKAGDVILVSRMEHHANIVPWQLVAQRTGATIRVAEITPDGALDLDALRAAMTPEVKLL
AVTHVSNVLGTVNPVREICREARKRGIITVVDGSQAVPHRKVDVAAIGCDFYAITGHKMC
GPTGTGALWARREHLDAMPPFLGGGEMIKEVSFDGTVFNDAPHKFEAGTPNIAGFIGLGV
AADYLQNVGLDHVEAREAELLAHFTEELRSVDGLRIIGEAPEKAAVVSFLIDGAHAHDLA
TLLDLEGVAVRSGQHCAHPLLQYFGVAATCRASLAFYNTHAEIERFMTALTKVRKLLG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtccaccccgcgcccgatcgaagaacgcaccggcgcccccgactgggaccgc
gtccgcctcgacttcccgctgctgatgcgggaagtgcacggcaagccgctggtctatttc
gacaatgccaacaccggccagaagccggtgcaggtgatcggcgcggtggacgagttctac
cgccgctacaacgccaacgtcagccgcgcggtgcatgcgctgggcagcgaggccaccgac
gcctacgaaggcgcgcgcaacacgctggcgcgcttcctcaacgtgcgccccagcgagctg
gtgctgtgcagcggcaccaccttcgccatcaacctggtggcgtactcgtgggcgctgccg
cggctgaaggccggtgatgtgatcctggtgtcgcgcatggagcaccacgccaacatcgtg
ccgtggcagctggtcgcgcagcgtaccggtgccaccatccgcgtggccgagatcacgcct
gacggcgcactggacctggatgcgctgcgcgcggcgatgaccccggaggtcaaactgctg
gcggtcacccatgtctccaacgtgctgggcacggtcaacccggtgcgcgagatctgccgc
gaggcgcgcaagcgcggcatcatcaccgtggtcgacggctcgcaggccgtgccacaccgc
aaggtcgacgtcgccgcgatcggctgcgacttctacgcgatcaccggccacaagatgtgc
ggcccgaccggcaccggcgccttgtgggcgcgccgcgagcacctggacgcgatgccgccg
ttcctcggtggcggcgagatgatcaaggaagtcagcttcgacggcaccgtgttcaacgat
gccccgcacaaattcgaagccggcaccccgaacatcgccggcttcatcggcctgggcgtg
gctgccgactacctgcagaacgtcggcctggaccatgtggaagcacgcgaagccgagctg
ctggcgcacttcaccgaagagctgcgcagcgttgatggcctgcgcatcatcggcgaagcg
ccggagaaggctgcggtggtctcgttcctgatcgatggcgcgcatgcgcacgatctggcc
acccttctggatctggaaggcgtggccgtgcgctcgggccagcactgcgcacacccgctg
cttcagtacttcggcgtcgcggctacctgccgagcttcgctggcgttctacaacacgcat
gccgagatcgagcggttcatgaccgcgctgaccaaggtacggaagctgttgggctga
DBGET
integrated database retrieval system
