Stenotrophomonas pavanii: STNY_R11680
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Entry
STNY_R11680 CDS
T07567
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spaq03000
]
STNY_R11680
Transcription factors [BR:
spaq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
STNY_R11680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_23
HTH_38
HTH_Crp_2
HTH_Tnp_ISL3
AIRS
HTH_24
HTH_5
Sigma70_r4_2
MarR
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
BCX42988
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All DBs
Position
1267157..1268164
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AA seq
335 aa
AA seq
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MATIYDIARHVGVSAGTVSRALSRPDKVLPATRARIEQAAASLGYVPNTVARTLKTQRSG
KILVTVPDIANPFFAQILQGAEEAAQAVGYAVLLGDTQHQPDREERYAQMLRRNEADGMI
VLGHRLPPTARAIVEQRGAAAPVVNGCEFDPALGIPSVHIDNAAAARTVMEHLYALGHER
IAVVGGPPDNPLHQQRLEGVRAAGRARGRLRQLSIVPGDFSVESGHAAAMALLHATPVPT
AVFCFSDQMALGTLAACRDLGIRVPDDLSVVGFDDLASSRYLTPPLTTVRQPMREIGERA
VNLLLAIIDQADVPLQQTLEFSFMLRGSTAVPRPG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatctacgacatcgcaagacacgtcggcgtgtccgccggtacggtgtcgcgc
gcgctttcgcggccggacaaggtgctgccggccacccgcgcgcggatcgaacaggcggcc
gcctcgttgggctatgtgcccaacacggtggcgcgcacgctcaagactcagcgcagtggc
aagatcctggtcactgtcccggacatcgccaatccgttcttcgcgcagatcctgcagggg
gcggaggaggccgcgcaggcggtcggctatgcggtactgctgggcgatacccagcatcaa
cccgaccgcgaggagcgctacgcgcagatgctcaggcgcaacgaggccgacggcatgatc
gtgctcggtcatcgcctgccgcccaccgcgcgcgcgatcgtcgagcagcgtggcgccgcc
gcgccggtggtcaacgggtgcgagttcgaccccgcactgggcatccccagcgtccacatc
gacaatgcggccgccgcacgcaccgtgatggagcatctgtacgcgctgggacatgagcgg
atcgccgtggtcggcgggccgcccgacaaccccctgcaccagcaacggctggaaggggtc
cgcgcggccggcagggcgcgtggccgcctgcgccagctcagcatcgtgccgggtgacttt
tccgtggagtccgggcatgcggcggcaatggcgctgctgcacgccacgcctgttccgacc
gcggtgttctgcttcagcgaccagatggcgctgggcaccctcgcggcctgccgggacctg
ggcatccgcgtgccggacgacctgtccgtcgtcggcttcgacgatctggcgtcgtcgcgt
tacctcaccccgccgttgacgaccgtccgccagcccatgcgcgagatcggcgagcgcgcg
gtcaacctgctgctcgcgatcatcgatcaggccgatgtaccacttcagcagacgctggag
ttcagtttcatgctgcgcggttcgacggcggtgcccaggcccgggtga
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