Stenotrophomonas pavanii: STNY_R12010
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Entry
STNY_R12010 CDS
T07567
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spaq02000
]
STNY_R12010
Transporters [BR:
spaq02000
]
Other transporters
Pores ion channels [TC:
1
]
STNY_R12010
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BCX43021
LinkDB
All DBs
Position
complement(1298254..1300446)
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AA seq
730 aa
AA seq
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MSLTFRNRLPRRALLPAALLASMALLATPSAFAAADGTADAKTLDRVSVRAEQSAPPAST
TRLPITLQETPQSATAISLQRLQDESLFSINDVMRNVTGVSVSFYDTQRPLYYARGFAIT
DFQVDGIPTYSGSTNQEYDTAFYDRIEVIRGANGLLSGAGVPSATVNLLRKRPGKEFDAS
FSVSAGSWDYRRMEADVTAPLTDDGRFRSRVVAAYTDRGLYYDRYDENKMAGMAVLEGDV
TDSTTVTLGYQTQDNNPTGSTWGTVPFFDNQGNFAHLPRSTNLSPKWSYWKRESNTAFAN
LEQRFGDNWLLKVNTAYTRGNVQNVRLYGTGNPDPVTGAGIYLRAAAGDSKDTRRNVDAY
LTGSFPLFGRDHDLTVGAQWSDLEGTTNTVALNFPTDWARCGSERCYYIPNVHSWNGDIS
EVTYNRTGARRVAKTTQSGVYLATRLHLADPLSLIAGARLSRWETLTRSYNATGAYTGTS
GAYKVSDEVTPYVGLVYEITPNVSAYASYTEIFNPQNYKDRNENLLAPVQGSNLEAGIKT
QWFDGRLTANAAVFEAKQDNYAVRDMSVPEGTLSDGSSAYIGVNGTKARGWEMDVNGEIL
PGWTVNAGYTRVKVTRAATDLLYANPPKDLLQLNTQLQLRGALERLSIGGGLQWQSRVQG
YNIAYPLGGTVTVNQPAYSLVQFNANYRISDNWTATLSVRNALDKTYWANLDYNNFGEPR
FVSASLRWKF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaccttccgtaaccgcctgccccgccgtgcgctgctgccggccgctttgctt
gcgtcgatggccctgctggccacgcccagcgcgttcgccgccgccgacggcacggccgac
gccaagaccctggaccgggtcagcgtgcgtgccgagcagtccgctccgccggccagcacc
acgcgcctgccgatcaccctgcaggaaaccccgcagtcggccaccgcgatcagcctgcag
cgcctgcaggacgaatcgctgttcagcatcaacgacgtgatgcgcaacgtgaccggcgtc
agcgtgtccttctatgacacccagcgcccgctgtactacgcacgcggctttgccatcacc
gacttccaggtcgatggcattcccacctacagcggctcgaccaaccaggaatacgacacc
gccttctacgaccgcatcgaagtgatccgcggtgccaacggcctgctcagcggcgccggc
gtgccgtcggccacggtcaacctgctgcgcaagcgccccggcaaggaattcgacgcatcg
ttctcggtcagtgccggcagttgggactaccgccgcatggaagccgacgtgaccgcacca
ctgaccgatgacggccgcttccgcagccgcgtggtcgccgcctataccgatcgcgggctg
tactacgaccgctacgacgagaacaagatggccggcatggcggtgctggaaggcgatgtc
accgacagcaccacggtcacccttggctaccagacccaggacaacaacccgaccggctcg
acctggggcacggtgccgttcttcgacaaccagggcaacttcgcgcacctgccgcgctcg
accaacctgtcgccgaagtggagctactggaagcgcgagagcaacaccgccttcgccaac
ctggaacagcgcttcggcgacaactggctgttgaaggtcaacaccgcctacacccgcggc
aacgtgcagaacgtgcgcctgtacggcaccggcaacccggacccggtgaccggcgcgggc
atctacctgcgcgcggccgccggtgattccaaggacacccgccgcaatgtcgatgcctac
ctgaccggcagcttcccgctgttcggccgcgaccacgacctcacggtcggcgcgcaatgg
tcggacctggaaggcaccacgaacaccgtggcgctgaacttcccgaccgactgggcccgc
tgcggcagcgaacgctgctactacattcccaacgtgcacagctggaacggcgacatctcc
gaggtgacctacaaccgtaccggcgcacgccgcgtggccaagaccacgcagagcggcgtc
tatctggccacccgcctgcacctggccgatccgctgtcgctgattgccggtgcgcgcctg
agccgctgggaaaccctcacccgctcctacaacgccaccggcgcctataccggcaccagc
ggtgcgtacaaggtgagcgatgaagtcaccccgtacgtgggcctggtctacgagatcacc
ccgaacgtgtcggcctatgccagctacaccgagatcttcaatccgcagaactacaaggac
cgcaacgagaacctgctggcaccggtgcagggctcgaacctggaagcgggcatcaagacg
cagtggttcgatggccgcctgaccgccaatgcggcggtgttcgaggccaagcaggacaac
tacgcggtgcgtgacatgagtgtgccggaaggcacgctgagcgacggcagctcggcctat
atcggcgtcaacggcaccaaggcacgtggttgggagatggacgtcaacggtgagatcctg
ccgggctggacggtcaatgccggctacacccgcgtcaaggtgacccgcgccgccaccgac
ctgctgtacgccaatccgcccaaggacctgctgcagctcaacacccagctgcagctgcgc
ggcgcgctggagcgactgagcatcggcggtggcctgcagtggcagagcagggtgcagggc
tacaacatcgcctacccgctcggcggcacggtgacggtgaaccagcccgcgtattcactg
gtgcagttcaacgccaactaccgcatcagcgacaactggaccgcgacgctgagcgtgcgc
aacgcgctggacaagacctactgggccaacctggactacaacaacttcggcgagccgcgc
ttcgtgtctgccagcctgcgctggaagttctga
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