Stenotrophomonas pavanii: STNY_R13330
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Entry
STNY_R13330 CDS
T07567
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spaq02000
]
STNY_R13330
Transporters [BR:
spaq02000
]
Other transporters
Pores ion channels [TC:
1
]
STNY_R13330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BCX43152
LinkDB
All DBs
Position
complement(1453465..1455669)
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AA seq
734 aa
AA seq
DB search
MPARTPRLKPHSLALALTALLPTVAFAAGEDDSHRDRHLTELSSVQVTASPLQGDAESLA
RPVEVLAGERLDEQKAGTLGDTVAKLPGVQSTFFGPGVGRPIIRGQEGPRVAVLSNGMGN
MDASTVSADHATSIEPFLADQIEVLKGPATLLFGSGAIGGAVNVVDGRIARELPERPLSG
RAELRGNSVNNERSGMFRLDGVSGNVVLHVDGLVRNGDDYRIPGYAVIDSLEDHHDHDHD
HEAAEGEEPRRGRLDNSSIRTRAGGVGATWLGDGGYFGVSASTYRTNYGIPNGAHVHADG
DDHDHDHGHDHGDEEEGGDEHDVRIDMVQNRFETKAGIYDPVSFLKNINARVAYTDYEHV
ELEAGTPSTRFTNRGIEARLEAVQQQIGGWDGAFGLQFGNSDFGAKGEEAFVPDTGTKNI
GLFVLQEKQFGPFKLELGGRHDQVKLDPSGDYRRRTFGATNLSAAGIWKLNDAVDLRIGV
DSSERAPTNEELYAAGAHIATRSLEIGDANLKTERGQRVELGIHTHSERLDFSASVYQTK
FKDFIYLADTGVTEGLPVRAWTQQDAVFRGAEAEALVHLFEGGAGDWDLRLFGDYVKAKL
DGSGSRNLDIAVPHGDHNHNYTVELANTGYLPRIAPARVGADLRWSKDGWRASVGAVRYS
RQKDVAQNEAPSDGYTLVDAHLAYRWDRNASNSYEVFLDGSNLTNREVRPHTSLLRDYSP
LPGRGVAFGIRAFF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgtaccccgcggttgaagccgcattccctcgccctcgccctgaccgccctg
ctcccgaccgttgccttcgccgccggcgaagacgattcccaccgtgaccgccacctgact
gaactgtcgtcggtgcaggtcaccgcttcgccgctgcagggcgacgccgaatcgctggca
cgcccggtggaggttctggccggtgaacgcctggacgagcagaaggccggcaccctcggt
gataccgtggccaagctgcccggcgtgcagagcaccttcttcgggccgggtgtcggccgc
cccatcatccgcggccaggagggcccacgcgtggcggtgctctccaatggcatgggcaac
atggatgcctccaccgtcagcgccgaccatgccaccagcatcgagccgttcctggccgac
cagatcgaggtcctgaaaggcccggccaccctgctgttcggcagcggtgcgatcggcggc
gcggtcaacgtggtcgatggccgcatcgcgcgcgaactgccggagcgcccgctgagcggc
cgcgccgaactgcgcggtaactcggtgaacaacgagcgcagtggcatgttccgcctcgat
ggcgtcagcggcaacgtcgtgctgcacgtggatggcctggtccgcaacggcgatgactac
cgtattcccggctacgcagtgatcgacagcctggaagaccaccatgaccacgaccacgac
catgaagcggccgaaggcgaagaaccgcgtcgcggccgcctcgacaacagctccatccgt
acccgcgccggtggcgtcggtgcgacctggctgggcgacggcggctatttcggcgtatcg
gccagcacctaccgcaccaactacggcattcccaatggcgcgcacgtgcatgccgacggc
gatgaccacgaccatgaccacggccacgatcatggcgatgaagaggaaggcggtgacgag
cacgacgtgcgcatcgacatggtgcagaaccgcttcgagaccaaggccggcatctacgac
ccggtctcgttcctgaagaacatcaacgcgcgcgtggcctacaccgactacgagcacgtg
gagctggaggccggcacgccgtcgacccgcttcaccaaccgcggcatcgaggcacgcctg
gaagccgtgcagcagcagatcggcggctgggacggcgccttcggcctgcagttcggcaac
agtgacttcggcgccaagggcgaagaggcgttcgtaccggataccggcacgaagaacatc
ggcctgttcgtgctgcaggaaaagcagttcggtccgttcaagctggaactgggcggccgc
cacgatcaggtcaagctggacccgagcggtgactaccgccgccgcacgttcggcgccacc
aacctgtctgccgctggcatctggaagctcaacgatgcggttgacctgcgcatcggcgtg
gacagctccgagcgtgcaccgaccaacgaagagctgtatgccgccggcgcgcacatcgcc
acccgctcgctggaaatcggcgatgccaacctgaagaccgagcgcggccagcgcgtggaa
ctgggcattcacacccacagcgaacgcctggacttctccgcgtcggtctaccagacgaag
ttcaaggacttcatctacctggccgacaccggcgttaccgaagggctgccggtgcgcgcc
tggacccagcaggacgcggtgttccgcggcgccgaggccgaagcgctggtgcacctgttc
gagggcggcgccggtgactgggacctgcgcctgttcggcgactacgtgaaggccaagctg
gatggcagcggcagccgcaacctggacatcgccgtgccgcacggcgaccacaaccacaac
tacacggtggagctggccaacaccggctacctgccgcgcatcgccccggcccgcgtcggc
gccgacctgcgctggtcgaaggatggctggcgtgcctcggtcggtgcagtccgctacagc
cgccagaaggatgtcgcccagaacgaagccccgagcgacggctacaccctggtcgatgca
cacctggcctaccgctgggatcgcaacgccagcaacagctacgaggtgttcctggatggc
agcaacctgaccaaccgcgaagtgcgtccgcatacctcgctgctgcgcgactactcgccg
ctgccgggccgtggtgtcgcattcggcatccgcgcgttcttctga
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