Stenotrophomonas pavanii: STNY_R13980
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Entry
STNY_R13980 CDS
T07567
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00300
Lysine biosynthesis
spaq01100
Metabolic pathways
spaq01120
Microbial metabolism in diverse environments
spaq01230
Biosynthesis of amino acids
Module
spaq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STNY_R13980 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spaq01002
]
STNY_R13980 (dapE)
Enzymes [BR:
spaq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
STNY_R13980 (dapE)
Peptidases and inhibitors [BR:
spaq01002
]
Metallo peptidases
Family M20
STNY_R13980 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BCX43217
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Position
1526953..1528080
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AA seq
375 aa
AA seq
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MSAVLDLTCELIARPSVTPDDAGCQALLAARLEQAGFQCDHLRLGEVDNLWATHGQGAPV
LVLLGHTDVVPTGPREAWTSDPFTPQVRDGVLYGRGTADMKGSVAAFVVAAEQFVAAHPD
HPGTLAVLLTSDEEGDAIDGVRHVARLFAERGQRIDWCITGEPSSTATLGDLLRVGRRGS
LSAKLRVQGVQGHVAYPEKARNPIHQAAPALAELSARRWDDGYESFPPTSLQISNIHAGT
GANNVIPGELEVDFNIRYNPHWDASKLEAEITALLDRHGLQYALKWHRSGEPFYTPEGTL
RATARAVLAEHIGRAPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQVDENVRVDDLE
ALPGLYQRLVERLLV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggtcctcgacctgacctgcgagctgatcgcacggccctcggtgacgccggac
gatgctggctgccaggcactgctggcggcgcgcctggagcaggccgggttccagtgcgat
cacctgcggctgggcgaggtcgacaacctgtgggcgacccatggccagggcgcgccggta
ctggtgctgctgggccataccgacgtggtgccgacgggcccgcgcgaggcctggaccagc
gacccgttcacgccgcaggtccgtgacggcgtgctgtatggccgtggtaccgccgacatg
aagggcagcgtggcggcattcgtggtggccgccgagcagttcgtcgccgcgcaccccgat
caccccggcacgctggcggtgctgctgaccagcgacgaggagggcgatgccattgatggc
gtgcgccacgtcgcgcggctgttcgccgaacgcggccaacgcatcgactggtgcattacc
ggcgagccgtcgtcgaccgcgacgctcggtgacctgctgcgcgtggggcgtcgtggcagc
ctgtcggccaagctgcgcgtgcagggcgtacaaggccatgtggcgtatccggaaaaggcg
cgcaacccgattcaccaggcggcgccggctctggccgaattgagtgcgcggcgttgggat
gacggctacgagagtttcccgccgaccagcctgcagatctccaacatccacgccggtacc
ggtgccaacaacgtgattcccggcgagctcgaagtggatttcaacatccgctacaacccg
cactgggatgcgtcgaagctggaagcggagatcaccgcactgctggaccggcacggcctg
cagtacgcgctgaagtggcatcgcagcggcgagccgttctacaccccggagggcacgctg
cgcgccaccgcgcgggcggtgctggccgagcacatcggccgtgcgccggaagaaagtacc
ggcggcggcacgtccgatgcacgcttcattgcgccgctgggtgcgcagtgcatcgaagtg
gggccggtcaacgccagcatccaccaggtggacgagaacgtgcgcgtggacgatctggaa
gcactgccggggctgtaccagcggctggtggaacggctgctggtgtga
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