Stenotrophomonas pavanii: STNY_R14790
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Entry
STNY_R14790 CDS
T07567
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spaq03016
]
STNY_R14790 (miaB)
Enzymes [BR:
spaq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
STNY_R14790 (miaB)
Transfer RNA biogenesis [BR:
spaq03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
STNY_R14790 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
BCX43295
LinkDB
All DBs
Position
complement(1618612..1620030)
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AA seq
472 aa
AA seq
DB search
MTGTPDVFPPATPDGTPLVALPAGPRKPDQVKGKLYIKTHGCQMNEYDSAKMADVLAASD
GLELTDSPDDADVILVNTCSIREKAQEKVFSQLGVWKGLKNKGREVIIGVGGCVASQEGE
AIIKRAPFVDLVFGPQTLHRLPELIRARREQKRPQVDISFPEIEKFDRLPEPRAEGPSAF
VSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPY
GDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLIDAFRDVPQLANFLHLPVQAGS
DRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDIGF
DHSFSFIYSRRPGTPAADLEDTISDAEKHARLSRLQERINAHAAGISEKMVGTVQAVLVE
GPSRKNPNELTGKTENMRSVNFPAPARLIGQFVDVLITEALTNSLRGRVVAE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggacgccagacgtctttccgcccgccacgccggacggtaccccgctcgttgcc
ctgcccgctggtccgcgcaagcccgaccaggtcaagggcaagctgtacatcaagacccac
ggttgccagatgaacgagtacgactcggccaagatggccgacgtgcttgccgccagcgat
ggcctggaactgaccgacagcccggacgacgccgacgtcatcctggtcaacacctgctcc
atccgcgagaaggcgcaggagaaggtgttcagccagctgggcgtgtggaagggcctgaag
aacaagggccgcgaagtcatcatcggcgtcggcggctgcgtcgcctcgcaggaaggcgaa
gcgatcatcaagcgcgcgccgttcgtggacctggtgttcggcccgcagaccctgcatcgc
ctgccggagctgatccgtgcacgtcgcgagcagaagcgcccgcaggtcgacatcagtttc
cccgagatcgagaagttcgatcgcctgcccgagccgcgcgccgaaggtccctcggcattc
gtgtcgatcatggaaggctgttccaagtactgttcgttctgcgtggtgccctacacccgc
ggcaccgaagtcagccgcccgttcgaggacgtggtggtggaagtggcgcagctggccgca
cagggcgtgcgcgagatcaacctgctcgggcagaacgtcaacgcgtatcgcgggccctat
ggtgacggtgagttcgccgacctcggcctgctgatccgtaccatcgccgagatcgatggg
gtcggccgcatccgcttcaccacctcgcacccgctggagttcagcgactcgctgatcgac
gcgttccgcgacgtcccgcagctggccaacttcctgcacctgccggtgcaggccggcagc
gaccgcgtgctgtcggcgatgaagcgtgggtacaccgcactggaattcaagtcgaagatc
cgcaagctgcgcgcggtgcgcccggacatctcgatcagctcggacttcatcgtcggcttc
cccggcgagaccgacgccgatttcgaaaagaccatgaagctgatcgaggacatcggcttc
gaccacagcttctcgttcatctattcacggcgcccgggcacgccggccgcggacctggag
gacacgatcagcgatgccgaaaagcacgcgcgcctgtcgcgcctgcaggagcgcatcaac
gcccatgccgccggcatctccgagaagatggtcggcaccgtgcaggccgtgctggtggag
gggccgtcgcgcaagaatccgaacgagctgaccggcaagaccgagaacatgcggtcggtg
aatttcccggcgcctgcgcggttgatcggccagttcgtggatgtcctgatcaccgaggcg
ctgaccaactcgctgcgcgggcgcgtggtggcggaataa
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