Stenotrophomonas pavanii: STNY_R15780
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Entry
STNY_R15780 CDS
T07567
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spaq03016
]
STNY_R15780 (truD)
Enzymes [BR:
spaq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
STNY_R15780 (truD)
Transfer RNA biogenesis [BR:
spaq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STNY_R15780 (truD)
Prokaryotic type
STNY_R15780 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Seadorna_VP6
Motif
Other DBs
NCBI-ProteinID:
BCX43385
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All DBs
Position
1707660..1708691
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AA seq
343 aa
AA seq
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MIPLPLAFGAPLLSARIRTTPEDFQVDELPAFEATGEGEHLLLHIRKRGANTVHVAKRLA
TWAGLPEMAVSYAGMKDRNAVTTQRFSVHLPKRIAPDLAGLASDEIEVLDATWHNRKLQR
GALAGNRFRLVLREVRGDAAAISERLQQIAERGLPNWFGEQRFGRDGGNVPAALAMFGGR
RMRKDQRSLLLSAARSALFNRVLAARVEQGNWDQPLQGEVWMLDGSRSVFGPEPYTDVLA
ERLARFDIHPSAPLWGEGELRSADAARALELAALDDDESKALRAGLEEARLKQERRALRL
RPALLQHQWLASDVLELSFALPPGCYATAVLHELGPVEDASQA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgctgccgttggcatttggtgcgccgttgctgtcggctcgcatccgcaccacg
ccggaggatttccaggtggacgagttgccggcgttcgaggctaccggcgaaggcgaacac
ctgctgctgcacatccgcaagcgcggtgccaacaccgtgcatgtggccaagcggctggcc
acgtgggcgggcctgccggagatggcagtgagctatgccggcatgaaggatcgcaacgcg
gtcaccacccagcgcttcagcgtgcacctgcccaagcgcatcgcaccggacctggccggt
ttggccagcgacgagatcgaggtgctcgacgcgacctggcacaaccgcaagctgcagcgc
ggcgcactggccggcaaccgcttcaggctggtgctgcgcgaagtgcggggtgatgccgcc
gcaatcagcgaacgcctgcagcagattgccgaacgcggcctgccgaactggttcggcgaa
cagcgcttcgggcgcgatggcggcaacgtgccagcggcactggcgatgttcggtggtcgc
cgcatgcgcaaggaccagcgttcgctgttgctgtcggctgcccgttcggcgctgttcaac
cgcgtgctcgccgcgcgcgtggaacagggcaactgggatcagccgctgcagggtgaagtg
tggatgctcgacggtagccgcagcgtgttcggtcccgagccgtacaccgacgtgctggcc
gagcgcctggcgcgtttcgacatccatcccagcgcgccgttgtggggcgaaggcgagctg
cgcagcgccgatgccgcacgcgcgctggagctggccgcgctggacgacgacgaatcgaag
gcgctgcgggccggcctggaagaggcgcggttgaagcaggaacggcgcgcgctgcgcctg
cgcccggcattgctgcagcatcagtggctggccagtgatgtactggaactctcgttcgcg
ctgccgccgggctgctacgccactgccgtactgcacgaactcggccccgtcgaagacgcc
tcgcaggcctga
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