Stenotrophomonas pavanii: STNY_R16800
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Entry
STNY_R16800 CDS
T07567
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spaq03400
]
STNY_R16800
Enzymes [BR:
spaq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
STNY_R16800
DNA repair and recombination proteins [BR:
spaq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
STNY_R16800
Prokaryotic type
STNY_R16800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCX43482
UniProt:
A0ABN6GQL9
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All DBs
Position
1811110..1812531
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AA seq
473 aa
AA seq
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MSVSVALVWFRRDLRLQDNPALQAALEAGHDVVPVYIHAPHEEGEWAPGAASDAWRHRSL
AALDTDLHARGSALVLRSGDSLPTLQALIEQAGAEAVYWNRKYEPATQPRDATIKRTLRE
QGIDAQSCNGSLLFEPWDIATQQGQPYKVFTPYWRNVLSHWRLPALQAAPKAMAAHTVDS
LALEDLQLAPTLDWDAGFWEHWQPGEAGALDALSVFEDGALRGYREQRDLPDRVGTSRLS
PHLHFGEIAPWRIAHALEGLRTAGTDADIDGYLRQLGWRDFAYHLLHHFPKTPTDNLNPR
FDRFPWATPTAAQLHHWQRGNTGVPIVDAGLRELWHTGYMHNRVRMIVASYLCKHLRAHW
LHGAHWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQARYISRWV
PELAALPVKARFAPWQHPQLLATHAPGYPRTPLVDLAAGRDAALAAYRQSGAG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtgtcggtagcgttggtatggttccgccgtgatctgcggctgcaggacaatccg
gccctgcaggccgcattggaggcggggcacgatgtggtgccggtctacatccatgcgccc
cacgaagaaggtgaatgggcgccgggtgcggcctccgatgcgtggcggcaccgttccctg
gctgcattggataccgacctgcacgcccgcggttccgcgctggtgctgcgcagcggtgac
agcctgccgaccctgcaggccctgatcgagcaggctggcgccgaagccgtgtactggaac
cgcaagtacgagccggccacgcagccacgcgacgccaccatcaagcgcacgctgcgcgag
cagggcatcgacgcgcagagctgcaacggcagcctgctgttcgaaccctgggacattgcc
acccagcagggccagccctacaaggtatttacgccgtattggcgcaacgtgctcagtcac
tggcgcctgccggcgctgcaggccgcaccgaaggcaatggcggcgcacacggtggacagc
ctcgcgctggaggatctccagctggcaccgacactggactgggatgctggcttctgggag
cactggcagccgggcgaggccggtgcgctggacgcgctgtcggtgttcgaggacggcgcg
ttgcgtggctatcgcgagcagcgcgatctgcccgatcgcgtgggcacctcgcggctgtcg
ccccacctgcactttggcgagatcgcgccgtggcgcatcgcccatgcgctggaggggctg
cgcaccgcaggcaccgatgccgacatcgatggttacctgcggcaactgggctggcgcgac
ttcgcctatcacctgctgcatcacttcccgaagacacccaccgacaacctcaacccacgg
tttgaccgtttcccctgggccacgcccactgcagcgcagctgcaccactggcagcgcggc
aacaccggcgtgccgatcgtcgacgccggcctgcgcgagctgtggcacaccggctacatg
cataaccgggtgcggatgatcgtggccagttacctgtgcaagcacctgcgcgcccactgg
ctgcatggtgcgcactggttctgggacaccctggtcgatgctgacctggccaacaacacg
atgggctggcagtgggtggcaggtaccggcgccgacgcggccccgtacttccgggtgttc
aacccggtcacccaggccgagaagttcgatccgcaggcccgctacatcagccgctgggtg
cccgaactggcggcgttgccggtgaaggcgcgcttcgcgccatggcagcacccgcagctg
ctggccacgcacgcgccgggctatccgcgcaccccgctggtggatctggctgctggccgc
gatgccgccctggccgcctaccgccagtcgggagcagggtaa
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