Stenotrophomonas pavanii: STNY_R17720
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Entry
STNY_R17720 CDS
T07567
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spaq03032
]
STNY_R17720
03036 Chromosome and associated proteins [BR:
spaq03036
]
STNY_R17720
03400 DNA repair and recombination proteins [BR:
spaq03400
]
STNY_R17720
DNA replication proteins [BR:
spaq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
STNY_R17720
Chromosome and associated proteins [BR:
spaq03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
STNY_R17720
DNA repair and recombination proteins [BR:
spaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
STNY_R17720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
PTS-HPr
Motif
Other DBs
NCBI-ProteinID:
BCX43574
LinkDB
All DBs
Position
1915273..1915578
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIEILARRQAHLKADDVDLAVKSLLEMMGGSLSAGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVLPLDADPA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaactgatcgaaatccttgcgcgccggcaggcgcacctgaaggccgat
gatgtcgatctggcggtgaagtcgttgctggaaatgatgggcggatcgctgtccgccggg
gatcgcatcgaaatccgtggttttggcagcttctcgctgcactatcgtccgccgcgcctg
ggccgcaacccgaagaccggcgaatcggttgccctgccgggcaagcatgtcccccatttc
aagccgggcaaggaactgcgcgagcgggtcagcagcgtgctgccgctggacgccgatccg
gcctga
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integrated database retrieval system
