Stenotrophomonas pavanii: STNY_R18270
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Entry
STNY_R18270 CDS
T07567
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spaq03000
]
STNY_R18270
Transcription factors [BR:
spaq03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
STNY_R18270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
HTH_22
TetR_C_41
HTH_36
HTH_11
DUF134
Sigma70_r4
Sigma70_r4_2
TetR_C_24
LacI
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
BCX43629
LinkDB
All DBs
Position
1976032..1976643
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AA seq
203 aa
AA seq
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MSRTPQRLTDRKRDAIVRAAVEEFRASGYEATSMDRIAEVAGVSKRTVYNHFPSKEALFS
MILEELWERSVASDALPYRPDQPLQGQLLQLLGQKLDLLSDANFIDLARVAMAEIIHSPE
RAQAIVCRMGEKESGESAWIRAAIADGRLRAVDPEFAGHQLHGLVKSFAFWPQVTMGQPP
LNEQERARVAESAVAMFLGFYAA
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtaccccgcagcgcctcaccgaccgcaaacgcgacgcgatcgtgcgcgctgcg
gtggaggagttccgtgcgtcgggctacgaggcgaccagcatggaccgcatcgccgaggtg
gcgggcgtctccaagcgcaccgtgtacaaccacttcccgagcaaggaagcgctgttctcg
atgatcctggaggagctgtgggaacgcagcgtggccagcgacgcgctgccgtaccggccc
gaccagccgctgcaggggcagttgctgcagttgctgggccagaagctggacctgctcagc
gatgccaacttcatcgacctggcgcgggtcgcgatggccgagatcatccactcgccggag
cgtgcgcaggccatcgtctgccgcatgggcgagaaggaaagtggcgagagtgcgtggatc
cgcgcggcaatcgccgatggccggctgcgcgcggtcgatccggaatttgccggccaccag
ctgcacgggctggtgaagagcttcgcgttctggccgcaggtgacgatggggcagccgcca
ctgaacgaacaggagcgcgcgcgcgtggccgagtcggcggtggcgatgttcctggggttc
tacgcggcctag
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integrated database retrieval system
