Stenotrophomonas pavanii: STNY_R22480
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Entry
STNY_R22480 CDS
T07567
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00520
Amino sugar and nucleotide sugar metabolism
spaq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
STNY_R22480
Enzymes [BR:
spaq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
STNY_R22480
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
BCX44049
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Position
complement(2427365..2429113)
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AA seq
582 aa
AA seq
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MTLSKQSPPARDRAGLRSLVRPLLAAALLLSAATSPASAPADAPPVYFDWFEYRGHDAAF
DTPLPAGHYRNPVLAGFHADPSIVSANGRFYLVNSSFTYFPGIPVFESADLVHWKQIGNV
IERPTQLDFDGLSVSRGIFAPTIEYHDGVFYVVTTATDSGGNFIATARDPAGPWSDPHWL
PGIDGIDPSLFFDDDGKVYLINNDAPPGTPRYDGHRAIWMQQIDLAAFQPVGPRRVLVDA
GVEPAKNPIWIEGPHIYKRQGWYYLSDAEGGTGPQHSQVVLRSRTVWGPYVPYAGNPILT
QRELPDDRPLPITNAGHADLVEGPDGSWWAVFLASRNYQKRHYNTGRETYLLPVRWQDGW
PRILPTDEAIPYVVKAPSWMQGEASQAPSTGNFVERDNFDGPTLDRQWLRVRVPKHAWAD
LATRPGMLAVHPLAEDLDTLRNPAFLGRRQQHLQFEASTAMSRPGPGVAAGLAAFQSEAY
WYFLGVRSLPDERLALFLEVRDGGGSTRTLATREVRAPEALRLKIAGNEGDYTFSFDTGD
GQGWQLLAGKVDGTVLSTDRAGGFVGALLGPFARDERTGRSK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgtccaagcagtcccctccggcccgcgacagggccggcctgaggtcactggtg
cgccccctgctggcggcggcactcctgctgtcggccgcaaccagcccggccagcgcgccg
gcggacgcaccgccggtgtacttcgactggttcgaatatcgcggccacgacgcggcgttc
gacacgccgctgccggccggccactaccgcaatccagtgctggccggcttccatgccgat
cccagcatcgtgagcgcgaacggccggttctacctggtcaattccagcttcacgtacttc
ccgggcattccggtgttcgagagtgccgacctggtgcactggaagcagatcggcaatgtg
atcgagcggccgacgcagctggacttcgacgggttgagcgtctcccgcggcatcttcgcc
cccaccatcgagtaccacgatggggtcttctacgtggtgaccacggccaccgacagtggc
ggcaacttcattgccaccgcgcgcgacccggccgggccatggtcggacccgcactggctg
cccggcatcgacggcatcgatccatcactgttcttcgatgacgacggcaaggtgtacctg
atcaacaacgacgcgccgcccggcacaccccgctatgacggccaccgcgcgatctggatg
cagcagatcgatctggccgccttccagccggtggggccgcgacgggtgctggtcgacgcg
ggcgtggagccggcgaagaacccgatctggatcgaaggcccccacatctacaagcgccag
ggctggtattacctgtccgacgccgaaggcggcaccgggccgcagcactcgcaggtggtg
ctgcgcagccgcaccgtgtggggcccgtatgtcccctacgcgggcaatccgatcctgacc
cagcgcgagctgcccgacgaccgaccgctgccgatcaccaatgccggccatgccgacctg
gtcgaaggcccggatggttcgtggtgggcggtgttcctggccagccgcaactatcagaag
cgccactacaacaccgggcgcgagacctatctgctgccggtgcgctggcaggacggctgg
ccacggatcctgccgaccgacgaggccatcccctacgtggtcaaggcgccgtcgtggatg
cagggcgaggcatcccaggctccctcgaccggcaacttcgtcgagcgcgacaactttgat
ggcccgacgcttgatcggcagtggctgcgcgtgcgggtgcccaagcatgcctgggccgac
ctggccacgcgtccgggaatgctggccgtgcacccgcttgccgaggacctggacacgctg
cgcaatccggcgttccttggccgacgccagcagcacctgcagttcgaggcgagcaccgcg
atgagccgccccgggcctggcgtggcggccggcctggccgcgttccagagcgaggcgtac
tggtatttcctgggcgttcgcagcctgccggacgagcggcttgcgctgttcctggaagtc
cgtgacggcggtggcagtacgcgcacactggccacccgcgaagtgcgggcaccggaggcg
ttgcggctgaagattgccggcaacgagggtgactacacgttctcgttcgacaccggcgac
gggcagggctggcagctgctcgcaggcaaggtggatggcaccgttctgagtacggaccgg
gcaggcggcttcgtaggcgcactgctgggtccctttgcgcgcgatgagcgcaccgggagg
agcaaatga
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