Stenotrophomonas pavanii: STNY_R27710
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Entry
STNY_R27710 CDS
T07567
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spaq03036
]
STNY_R27710 (smc)
Chromosome and associated proteins [BR:
spaq03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
STNY_R27710 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_23
SMC_hinge
AAA_29
YscO
DUF4200
TPR_MLP1_2
ABC_tran
DUF1664
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
BCX44564
LinkDB
All DBs
Position
complement(2991385..2994888)
Genome browser
AA seq
1167 aa
AA seq
DB search
MRLSTIKLSGFKSFVDPTTLHLPSNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDS
LTDVIFSGSNARKPVSQATVELIFDNSDHTISGEYASFNEISVKRTVSRDGTGNYYLNGT
KCRRRDITDLFLGTGLGPRSYSIIEQGMISQIIEARPEDLRVYLEEAAGISKYKERRKET
ETRIRHTRENLDRLGDLRDEISKQLEHLKRQAKQAEQYQALQEERRVKDAEWKALEFRGL
DGRLSKLREGLSQEETRLQQLIADQRDAEARIETSRARREEAADALNTAQAAVYQVGSTL
ARLEQQIQHQRELSQRLHKARDETQQALAELGQHISGDEARLSVLREAVEAATPQLEALQ
EENEIKQESLREAEERLASWQQRWEQHTSQSSEASRAGDVERTRVDYLDKQILDADRRRE
ALAAERAGLDVDALEKAFEQLHLQHDTQKAALDELSEDVELRKQGVAAVQEQQRNGQNEL
AELRKQANGLRGRLASLETLQQAALGQEQGAAVAWLKARGLDSAARVGERLDVDAGWENA
VESALGQLIEGVLVDDPASLVDALGELGDGHLALVANDDAELKVAPTSLAARVRGPVAIR
RLLAHLHAARDLSEAKALQASLPEGDSIITQSGERLGRGWLRVSRSGAAEQGALLREREI
QELREQIEQLQDREAELEDQLAGFREQLQAAEQQREDAQRALYQAHRAVSELAGQLQGQQ
GKVEAARTRIDRIEGELKQLQETIEANNEQAREARSRLENAVSSMGDLESTRQRLEGERR
QLTEARDLARDAARAVRERSHALALTLESQRAQLASLSQALERMGTQRGQLDSRLGELHS
QLDEGDSPVEALQAEHQNALEERVRADRVLTEARTLLDGIDAELRNYEQTRHQRDEQALA
QRERISQRKLDQQALVLSADTLQAAVEKAGFVLQDVLNALPEDARLGDWEQAVHQIDARM
RRLEPVNLAAIHEYGEASQRSDYLDSQHADLTTALETLEDAIRKIDRETRGRFKDTFDRV
NAGVQALYPRLFGGGHAYLELTGEDLLDTGVTIMARPPGKRVSSISLLSGGEKAMTAVAL
VFAIFQLNPAPFCLLDEVDAPLDEANVGRLANMVKEMSEKVQFLFVSHNKATMEAAHQLS
GVTMREPGVSRLVSVDLEEAARLAGAA
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttccacgatcaagctgtccggcttcaagtcgttcgtcgatccgaccaccctt
cacctgccgagcaacatgaccggcgtggtggggcccaatggctgcggcaagtcgaacatc
atcgacgccgtgcgctgggtcatgggcgagagctcggccagccgcctgcgcggcgactcg
ctgaccgacgtgatcttttccggttccaatgcccgcaagccggtgtcgcaggccacggtc
gagctgatcttcgacaactccgaccacacgatctccggcgagtacgcctcgttcaacgaa
atctcggtcaagcgcacggtcagccgcgacggtaccggcaactactacctcaacggcacc
aagtgccgccgccgcgacatcaccgacctgttcctcggcaccggcctgggcccgcgcagc
tactcgatcatcgagcagggcatgatcagccagatcatcgaggcgcgcccggaagacctg
cgtgtgtacctggaagaggcagccggcatctccaagtacaaggagcgccgcaaggaaacc
gagacccgcatccgccacacccgcgagaacctggaccggctgggcgacctgcgcgacgag
atcagcaagcagctggagcacctcaagcgccaggccaagcaggccgagcagtaccaggcc
ctgcaggaagagcgccgggtcaaggacgccgagtggaaggcgctggaattccgcggcctc
gacggacgcctgtccaagctgcgcgaagggttgtcgcaggaagaaacgcggctgcagcag
ctgattgccgaccagcgtgatgccgaagcccgcatcgaaacctcgcgcgcgcggcgcgaa
gaggctgccgacgcgctcaataccgcgcaggcggcggtctaccaggtcggcagtacgctg
gcgcgcctggaacagcagatccagcaccagcgcgagctgtcgcagcgcctgcacaaggcg
cgcgatgaaacgcagcaggcgctggccgaactgggccagcacatcagcggcgacgaggcc
aggctgagcgtgctgcgcgaggcggtggaggccgccaccccgcagctggaagccctgcag
gaagagaacgagatcaagcaggaaagcctgcgcgaggccgaagaacggctggccagctgg
cagcagcgctgggaacagcacacctcgcagagttcggaagcctcgcgcgccggcgatgtc
gagcgcacgcgcgtagactacctggacaagcagatcctcgatgccgaccggcgtcgtgaa
gccctggccgccgagcgcgccgggctggacgtggacgcgctggagaaagccttcgagcag
ctgcacctgcagcacgacacgcagaaggccgcgctggatgaactgagcgaagacgtcgag
ctgcgcaagcagggcgtggcggccgtgcaggaacagcagcgcaatggccagaacgaactg
gccgaactgcgcaagcaggccaacggcctgcgcggccgcttggcctcgctggaaaccctg
cagcaggccgcgctgggccaggagcagggcgcggccgtcgcctggctgaaggcgcgcggg
ctggattcggcggcgcgcgtcggcgagcgcctggacgtggatgccggctgggaaaacgcg
gtggagagcgcgctcggccagttgatcgaaggcgtgctggtcgatgacccggccagcctg
gtcgacgcgcttggcgagctgggcgacggtcacctcgcgctggtcgccaacgacgatgcc
gaactgaaggttgcacccacctcgctggccgcacgcgtgcgtggcccggtggcgatccgt
cggctgctggcacacctgcatgcggcccgcgacctgtccgaggcgaaggcgctgcaggcc
agcctgcccgaaggcgattcgatcatcacccagagcggcgagcgcctgggccggggctgg
ctgcgcgtgtcgcgctccggtgccgccgagcagggcgcgctgctgcgcgaacgtgagatc
caggaactgcgcgagcagatcgaacagctgcaggaccgcgaggccgaactggaagaccag
ctggccggtttccgcgagcagctgcaggcggccgaacagcagcgcgaggacgcgcagcgc
gcgctgtaccaggcccatcgcgcggtgtccgaactggccggccagttgcagggccagcag
ggcaaggtggaggctgcacgcacgcgcatcgaccgcatcgaaggcgagctgaagcagctg
caggaaacgattgaagccaacaacgagcaggcgcgcgaagcgcgctcgcggctggagaac
gcggtcagcagcatgggtgacctggagtcgacccggcagcggctggagggcgagcgccgc
cagctgaccgaggcccgcgacctggcccgcgatgccgcccgtgcggtgcgcgagcgctcg
catgcgctggcactgaccctggaatcacagcgcgcgcagctggcctcgttgagccaggcg
ctggagcgcatgggcacccagcgtgggcagttggattcgcgactgggcgagctgcactcg
cagctggacgaaggtgactcgccggtcgaagcgctgcaggccgaacaccagaacgcgctg
gaagagcgcgtgcgcgccgaccgcgtgctgaccgaggcgcggacgctgctggacggcatc
gacgccgagctgcgcaactacgagcagacccgccaccagcgcgacgaacaggcgctggcc
cagcgcgagcggatttcgcagcgcaagctggaccagcaggcactggtgctcagcgccgac
accctgcaggcggcggtggaaaaggccggcttcgtgctgcaggatgtgctcaacgcactc
cccgaggatgcgcgcctgggcgactgggagcaggccgtgcatcagatcgacgcacgcatg
cgccggctggagccggtcaaccttgcggccatccacgagtacggcgaggcttcgcagcgt
tcggattacctggattcgcagcacgcggacctgaccaccgcgctggaaaccctggaagac
gcgatccgcaagatcgatcgcgagacccgcggccgcttcaaggacaccttcgaccgcgtc
aacgccggcgtgcaggcgctgtacccgcgcctgttcggtggcggccatgcttacctggag
ctgaccggtgaagacctgctcgataccggcgtgaccatcatggcgcgcccgccgggcaag
cgcgtgtccagcatctcgctgctgtccggcggcgagaaggcgatgaccgccgtggcgctg
gtgtttgccatcttccagctgaatccggcgccgttctgcctgctggacgaggtggacgca
ccgctggacgaagccaacgtcggtcgcctggccaacatggtcaaggaaatgagcgagaag
gtgcagttcctgttcgtcagccacaacaaggcgacgatggaggcggcgcaccagctctcg
ggcgtgaccatgcgcgagccgggcgtcagccgcctggtgagcgtggacctggaagaagcc
gcgcgattggcgggcgcggcctga
DBGET
integrated database retrieval system
