Stenotrophomonas pavanii: STNY_R28800
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Entry
STNY_R28800 CDS
T07567
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaq03009
]
STNY_R28800
Enzymes [BR:
spaq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
STNY_R28800
Ribosome biogenesis [BR:
spaq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STNY_R28800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
BCX44673
LinkDB
All DBs
Position
3114632..3116266
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AA seq
544 aa
AA seq
DB search
MSDTPRNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRALEQRIAEGLVKVNGEVAQTG
MSVKSGDRIELDGRGFVATALAEPSRVLVYNKPEGEVTTREDPEGRPTVFESLPPLKGAR
WIAIGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGEEKVSDAIVDRLS
RGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTRYGK
VSLPRELARGHSVELSTPQVEALRAQLKLEEGAPSALTLQPVIGQRRAAKTTVRVREGGR
GNAYVNGHNTADEGRELRRFDNVREDRGRGRGGKGGGFKGGLTVSGEAAAKQSQKPFKQR
APKNDRSLPEGNPAAFRTWYVPDGVSTGPSGHRNAGPGARGPGARGPGAGGQGRPYGKPK
GPGAGAGGGQGRGGFGGEGRGGAGGQGRPAGAGNRSQGQGNKHPYGHPGNAPSFPSDHAT
PGFNPYVSPKPAQGARPGGRGPGGGNRGPGGNRGPGGPGGNRGPGGPGGNRGPGGPRRSG
PRGG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgtaacaagctctcgctgaagcgcgaagccacctccgaacagttc
aagctggaagagcgcctgcacaaggtgctggcccaggccggccttggctcgcgccgcgcg
ctggaacagcgcatcgccgaaggcctggtcaaggtcaacggtgaagtcgcgcagaccggc
atgtcggtcaagagcggcgacaggatcgaactggacggtcgcggcttcgtcgccaccgcg
ctggccgaaccgtcgcgcgtgctggtctacaacaagcccgaaggcgaagtgaccacccgc
gaagatccagaaggtcgcccgaccgtgttcgaatcgctgccgccgctgaagggcgcgcgc
tggatcgcgatcggccgcctggacatcaacaccaccggcctgctgctggccaccaccgac
ggtgagctagccaacgccatgatgcacccgtcgttcgaggtcgagcgcgagtacgtggtg
cgcgtgcgtgcaccggaaggcgaggaaaaggtctccgacgccatcgtcgaccgcctcagc
cgtggcgtcgcgctggaggacggcccggccaagttcgacgagatcgaacgcatcggcggc
accgattcgcacgactggttccgcgtcgtggtgaaggaaggccgcaaccgcgaagtgcgc
cgcctgtgggaatcgcagggctgccaggtcagccgcctgaagcgcacccgctacggcaag
gtcagcctgccgcgcgaactggcccgtggccattcggtggaattgagcaccccgcaggtt
gaagccctgcgcgcgcagctgaagctggaagaaggcgcaccgtcggcgctgacgctgcag
ccggtgatcggccagcgccgcgccgccaagaccaccgtgcgcgtgcgcgaagggggccgc
ggcaacgcctacgtcaacggccacaacaccgctgacgaaggtcgcgagctgcgccgtttc
gacaacgtccgcgaagatcgcggtcgtggccgcggtggcaagggcggtggcttcaagggt
ggcctgacggtcagcggtgaagcggcggccaagcagtcgcagaagccgttcaagcagcgc
gccccgaagaacgatcgctcgctgccggaaggcaacccggccgcgttccgcacctggtac
gtgccggatggcgtgagcaccggcccgagcggccatcgcaacgccggtccgggcgcgcgt
ggcccgggtgcccgtggtccgggtgctggcggccagggccgtccgtacggcaagccgaag
ggcccgggtgctggcgccggtggcggccagggccgtggcggtttcggtggcgaaggccgt
ggtggcgcaggcggccagggccggccggccggtgcgggcaaccgctcgcagggccagggc
aacaagcatccgtatggccatccgggcaacgctccgagcttcccgtccgaccacgccacg
ccgggcttcaacccgtacgtcagcccgaagccggcgcagggcgcccgtccgggcggtcgt
ggtccgggtggtggcaaccgtgggccgggcggcaatcgcggccccggcggaccgggtggc
aaccgtggtccgggtggccccggtggcaaccgcggtcccggcggcccgcgccgcagcggc
ccgcgcggcggctga
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