Stenotrophomonas pavanii: STNY_R29040
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Entry
STNY_R29040 CDS
T07567
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
spaq
Stenotrophomonas pavanii
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_16
TPR_17
BTAD
TPR_20
TPR_11
DUF1570
Motif
Other DBs
NCBI-ProteinID:
BCX44695
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Position
3136660..3138690
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AA seq
676 aa
AA seq
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MVVHRRLALCVGLACTALAWASSAAPPSGREAALAEIGHYRDQARWLDALGAIERASQQQ
PDDDLLFKLRVLTLGDIGNAWRAWELYQQRPQLFDAAQKQRLEGDYLAKLVVWSLAYSSS
EDSRLQEAESTLARMQRYLGGEGTPPSQAPLRIRMDRLILLNRLGRHAQVREEARALQAE
GHTLPDYELPAVGDSLMGTLHPEEAIPVLQAAVAGDPTRDASHSELAYAYLESEQQEKAI
DLLQAWRDKEPAWRWSNGKAPYANWSRYEADLNLAMVRAYSGDLRTAQHDLESMVDIAPG
NGGLQSALGSVYMMRGWPRRALQRQQMAHALDPRDIEPRLGMEEAYVALQRDDLARPLHD
DLVARYPTQPAVERMDQAWRAHRGWQLKAWTDIGRSSGGGGTSPLGNNDRHYGVEVETPL
LDDRWRLFALADRRSTDFQDQRIDPLWLGAGVRYRFGRLDAEAAVLRANDHIGDTGLRFG
VGWQFTDSWHAGLVVARNDPEASMQARASGITADSVSAQVDYRRSELTHWTFGASRFRYD
DGNHRELFGTSVQQRLLTRPRWLIDGLASAYTSRGSRDDAPYFNPKRDRMVEIGLRIDQQ
LWRHYERHFRHRLTVSLGDYWQDGFGSAPVPTVSYMHEWQLGPGRVFEYGVRWSRPVYDG
HRERHIGFEAALRWGD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggttgtccaccgtcggctggcgctctgcgtcggccttgcctgtaccgcgctggcctgg
gccagcagcgctgctccaccgagcggccgcgaggcggccctggccgagatcggccactac
cgcgaccaggcccgctggctggatgccttgggcgcgatcgagcgcgccagccagcaacag
cccgatgacgacctgctgttcaagctgcgcgtattgacgctgggcgacatcggcaacgcc
tggcgcgcgtgggagctgtaccagcagcgcccgcaactgttcgatgccgcccagaagcag
cgcctggaaggtgactacctggccaagctggtggtctggagcctggcctacagcagcagc
gaggacagccgcctgcaagaggccgaatcgaccctggcccgcatgcagcgctacctcggc
ggcgaaggcaccccaccctcgcaggcaccactacgcatccgcatggaccggctgatcctg
ctcaaccggctgggccgccatgcgcaggtgcgcgaggaagcacgggcgctgcaggccgaa
ggccacaccctgcccgactacgagctgcccgccgtcggcgattcgctgatgggcaccctg
catccggaggaagccattccggtactgcaggcggcggtggcaggcgacccgacgcgcgat
gcctcgcattcggagctggcctatgcctatctggaaagcgaacagcaggaaaaggccatc
gacctgttgcaggcatggcgcgacaaggaaccggcgtggcgctggagcaacggcaaggca
ccgtacgcgaactggtcgcgctacgaggccgatctcaacctggcgatggtgcgcgcctac
agcggtgacctgcgcaccgcgcagcacgacctggaatcgatggtcgacatcgcaccgggc
aacggcggcctgcagagtgcgctgggcagcgtctacatgatgcgcggctggccacgccgg
gcgctgcaacggcagcagatggcacacgcgctcgacccgcgagacatcgaaccgcggctg
ggcatggaagaggcctatgtcgccctgcagcgcgacgacctggcgcggccgctgcacgat
gacctggtcgcgcgctaccccacccaaccggcggtcgaacgcatggaccaggcctggcgc
gcgcatcgcggctggcagctgaaggcctggaccgacatcggccgcagctccgggggcggt
ggcacctcgccactgggcaacaacgaccgccactacggcgtggaagtggagacaccgctc
cttgatgaccgctggcggttgttcgccctggccgaccggcgctcgaccgacttccaggac
cagcgcatcgatccgctgtggctgggtgcgggcgtgcgttaccgcttcgggcggctggat
gcggaagcggcggtgctgcgcgccaacgaccacatcggcgacaccggcctgcgcttcggc
gtcggctggcagttcaccgattcctggcacgccggcctggtggtcgcacgcaatgacccg
gaggcctcgatgcaggcgcgtgcgtccggcatcaccgccgacagcgtgagcgcacaggtg
gactaccggcgcagcgagctcacccactggacgttcggcgcgagccgcttccgctatgac
gacggcaaccatcgcgagctgttcggcaccagtgtccaacagcgcctgctgacccgcccg
cgctggctgatcgatggcctggccagcgcctacaccagtcgcggcagccgcgacgatgcg
ccctacttcaacccgaagcgcgaccgcatggtcgagatcgggctgcgcatcgaccagcag
ctgtggcggcactacgagcgccacttccggcatcgcctgaccgtctcgctgggcgactac
tggcaggacggtttcggcagtgcaccggtaccgacggtgtcctacatgcacgagtggcag
ctgggtcccggccgcgtgttcgagtatggcgtgcgctggtcacggccggtctacgacggc
caccgcgagcgccacatcggcttcgaagccgcattgcgctggggagactga
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