Stenotrophomonas pavanii: STNY_R30250
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Entry
STNY_R30250 CDS
T07567
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00260
Glycine, serine and threonine metabolism
spaq00400
Phenylalanine, tyrosine and tryptophan biosynthesis
spaq01100
Metabolic pathways
spaq01110
Biosynthesis of secondary metabolites
spaq01230
Biosynthesis of amino acids
Module
spaq_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
STNY_R30250 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
STNY_R30250 (trpB)
Enzymes [BR:
spaq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
STNY_R30250 (trpB)
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Gene cluster
GFIT
Motif
Pfam:
PALP
Phage_min_cap2
Motif
Other DBs
NCBI-ProteinID:
BCX44809
UniProt:
A0A246L162
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Position
complement(3257944..3259161)
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AA seq
405 aa
AA seq
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MSASPIADYHAFPDAQGHFGRYGGSFVAETLVGPLQELAQAYDQARQDPAFQAAYDRDLA
HYVGRPSPIYHAQRLSDHVGGAQILLKREDLNHTGAHKINNTIGQALLAARMGKKRIIAE
TGAGQHGVASATVAARLGLECVVYMGATDIERQKINVYRMKLLGATVVPVTSGSATLKDA
LNEAMRDWVTNVQDTFYIIGTVAGPDPYPRMVRDFNAIVGREAREQMLAEYGRLPDAITA
CVGGGSNAIGLFHAFLNDRQVEIVGAEAAGDGISTGRHAASIAAGRPGVLHGNRTYVLCD
DDGQIIETHSVSAGLDYPGVGPEHAFLADTGRARYLGITDDEALQAFHLLAHTEGILPAL
ESSHALAQAIKLARERPRDQIVLCNLSGRGDKDVHTIAAREGLVL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcccccattgccgactaccacgccttcccggatgcccagggccatttcggc
cgctacggtggcagcttcgtcgccgaaaccctggtcggcccgctgcaggaactggcccag
gcctatgaccaggcccgccaggacccggcgttccaggcggcctacgaccgcgacctggcc
cactacgtgggccggccgagcccgatctaccacgcccagcgcctgagcgaccatgtgggc
ggtgcgcagatcctgctcaagcgcgaagacctgaaccacaccggcgcgcacaagatcaac
aacaccatcggccaggcgctgctggcggcgcggatgggcaagaagcgcatcatcgccgag
accggtgccggccagcacggcgtggccagcgccaccgttgccgcgcggctgggcctggag
tgcgtggtgtacatgggcgccaccgacatcgagcggcagaagatcaacgtctaccgcatg
aagctgctcggcgcgacggtggtgccggtcacctccggctcggccaccctgaaggacgcg
ctcaacgaagcgatgcgcgactgggtgaccaacgtgcaggacaccttctacatcatcggt
acggtcgccggcccggatccctatccgcgcatggtgcgcgacttcaatgccatcgtcggc
cgcgaggcacgtgagcagatgctggccgagtatggccgcctgcccgatgcgatcaccgcc
tgcgtcggtggcggcagcaatgccatcggcctgttccatgccttcctcaacgaccgccag
gtcgagatcgtcggtgccgaggccgccggtgacggcatcagcaccgggcgccacgccgca
tcgatcgctgccggtcgccctggcgtgctgcatggcaaccgcacctatgtgctgtgcgac
gacgacggccagatcatcgagacccattcggtgtcggccggcctggactatccgggcgtt
ggcccggagcacgcgttcctggccgacaccggccgcgcccgctatctcggcatcaccgat
gacgaagcgctgcaggcgttccacctgctggcgcataccgagggcatcctgccggcactg
gagtccagccatgcgctggcacaggcgatcaagctggcgcgcgagcgtccgcgtgaccag
atcgtgctgtgcaatctgtccggccgtggcgacaaggacgtgcacaccatcgccgcgcgc
gaagggctggtgctgtga
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