Stenotrophomonas pavanii: STNY_R30280
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Entry
STNY_R30280 CDS
T07567
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spaq03016
]
STNY_R30280 (truA)
Enzymes [BR:
spaq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
STNY_R30280 (truA)
Transfer RNA biogenesis [BR:
spaq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STNY_R30280 (truA)
Prokaryotic type
STNY_R30280 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AtzH-like
Motif
Other DBs
NCBI-ProteinID:
BCX44812
LinkDB
All DBs
Position
complement(3261208..3261978)
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AA seq
256 aa
AA seq
DB search
MRYALGVEYDGSDFRGWQNLGEGGPSVQASLEQALSSVADAPLQVVCAGRTDAGVHGQCQ
VVHFDTDVARDPRAWMLGTTTRLPRSVAVRWCVPVADDFHARFSARARRYRYRLLNREVR
PALQRQTLSWERRALDETLMHTAGQALLGENDFSAFRSVQCQALHARRELQSLQVTRQGE
VIEVAVQGNAFLHHMVRNIVGSLILVGSGEKPVDWIAELLAGRDRTVAGPTAPPQGLVFL
GPLYPDNWHLPAEVTL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacgcgcttggcgtcgagtacgacggcagcgatttcaggggctggcagaacctg
ggcgagggtggccccagcgtgcaggccagccttgagcaggcgctgtcgtcggtcgcagac
gcgccgctgcaggtggtctgtgccggccgcaccgacgccggcgtgcacggccagtgccag
gtcgtgcatttcgatacggacgtggcgcgtgatccgcgcgcctggatgctgggcaccacc
acccgcctgccacgctcagtcgcggtgcgctggtgcgtgccggtggccgacgacttccat
gcccgtttctcggcgcgtgcgcgccgctaccgctaccgcctgctcaaccgcgaggtgcgg
ccggcgctgcagcggcagacgctcagctgggagcgccgcgcgctggacgagacgctgatg
cacactgccggccaggccctgctcggcgagaacgacttcagcgcgttccgctcggtgcag
tgccaggcgttgcatgcgcggcgcgaactgcagtcactgcaggtcacccgccagggcgag
gtgatcgaggtcgccgtgcagggcaatgcattccttcatcacatggtccgcaatatcgtc
ggatcgctgatcctggtgggcagtggcgagaagccggtggactggatcgccgaactgctg
gccgggcgcgatcgcaccgtagccggtcccaccgcaccgccgcagggcctggtgttcctt
gggcccctgtaccccgacaactggcatctgcccgccgaggtcacgctatga
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