Stenotrophomonas pavanii: STNY_R30390
Help
Entry
STNY_R30390 CDS
T07567
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spaq03400
]
STNY_R30390
DNA repair and recombination proteins [BR:
spaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
STNY_R30390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
FtsK_SpoIIIE
DUF87
ResIII
AAA_22
AAA_30
CbiA
AAA_10
AAA_16
AAA_25
T2SSE
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
BCX44823
LinkDB
All DBs
Position
3272558..3274063
Genome browser
AA seq
501 aa
AA seq
DB search
MDPILLGKGITDDIAVTLLPKLGNRHGLVAGATGTGKTVTLMTLAEGFSRLGVPVFLADV
KGDVSGLAVPGSGAENLLQRAAEIGVADYAPAASPAIFWDLYGKLGHPVRTTVSEMGPTL
LARILELNDTQAGVLDIVFKLADDRGLLLLDMDDLRALLGLVAEERKDISTEYGLVSAQS
IAAIQRSVLRLAQDGGENFFGEPALELADIMRVNHDGRGVIGILAADQLVLKPKLYSTFL
LWLLSELFEQLPEVGDLDKPKLVFIFDEAHLLFDDAPPSLVQRIEQVVRLIRSKGVGVYF
CSQFPDDVPGNILGQLGNRVQHALRAFTPRDQKAVKTAAETFVPNPKLDVAKVLSQLGTG
EALVSTLQDKGIPMPVQQTLIAPPRCRMGPITEAERAQVRAGSPVGSRYDTAVNRESAAE
LLAQRAQKSVEKAQAPAARSREQDDAQEGGFGQAIKDAIFGTKRRQGMIETMAKQTTRTV
GTKLGNQIVRGILGGIFGGKR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatccgattctgctcggcaaaggcattaccgacgatattgccgtcaccctgctgccg
aaactcggcaaccgccacggcctggtggccggcgccaccggcaccggcaagacggtgacc
ctgatgacgctggccgaggggttttcgcgactgggcgtgccggtgttcctggccgatgtg
aagggtgatgtgtccggcctggcggtgcccggcagcggcgccgagaacctgctgcagcgt
gccgccgagatcggcgtggccgactacgcgccagccgccagccccgccatcttctgggac
ctgtacggcaagctcggccatccggtgcgcaccacggtcagcgagatgggcccgaccctg
ctggcgcgcatcctcgaattgaacgacacccaggccggcgtgctcgatatcgtgttcaag
ctggccgacgaccgcggcctgctgctgctggacatggacgacctgcgcgccctgctcggc
ctggtcgccgaggagcgcaaggacatctccaccgagtacggcctggtcagcgcgcagtcg
atcgccgcgatccagcgttcggtgctgcgcctggcgcaggacggtggcgagaatttcttc
ggcgaaccggcgctggagctggccgacatcatgcgggtcaaccacgacggccgcggcgtg
atcggcatccttgccgccgaccagctggtactcaagcccaagctgtactccaccttcctg
ctgtggctgctgtcggagctgttcgagcagctgccggaagtaggcgacctggacaagccg
aagctggtcttcatcttcgatgaggcgcacctgctgttcgatgatgcaccgccgtcgctg
gtgcagcgcatcgagcaggtggtgcggctgatccgttccaagggcgtgggcgtgtacttc
tgctcgcagttccccgacgacgtcccgggcaacatccttggccagctcggcaaccgcgtg
cagcacgcgctgcgtgcgttcaccccgcgtgaccagaaggcggtgaagaccgcggccgag
acgttcgtgccgaacccgaagctggacgtggccaaggtgctgagccagctcggcaccggt
gaggcactggtctccacgctgcaggacaagggcatcccgatgccggtgcagcagaccctg
atcgcgccgccgcgctgcaggatgggcccgatcaccgaggccgagcgcgcccaggtgcgt
gccggcagcccggtcggcagccgctacgacaccgcggtcaaccgcgaatcggccgccgag
ctgctggcccagcgcgcgcagaagagcgtcgagaaggcacaggcgccggccgcgcgcagc
cgcgagcaggacgacgcacaggaaggcgggttcggccaggcgatcaaggacgcgatcttc
ggcaccaagcgccgccagggcatgatcgaaaccatggccaaacagaccacgcgcaccgtc
ggtaccaagctgggcaaccagatcgtgcgcggcatcctcggcggcatcttcggcggcaag
cgctga
DBGET
integrated database retrieval system
