Stenotrophomonas pavanii: STNY_R31480
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Entry
STNY_R31480 CDS
T07567
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
STNY_R31480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaq03019
]
STNY_R31480
03009 Ribosome biogenesis [BR:
spaq03009
]
STNY_R31480
03036 Chromosome and associated proteins [BR:
spaq03036
]
STNY_R31480
Enzymes [BR:
spaq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
STNY_R31480
Messenger RNA biogenesis [BR:
spaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STNY_R31480
Ribosome biogenesis [BR:
spaq03009
]
Eukaryotic type
90S particles
RNase
STNY_R31480
Prokaryotic type
rRNA processing factors
STNY_R31480
Chromosome and associated proteins [BR:
spaq03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
STNY_R31480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BCX44931
UniProt:
A0A246L0D8
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All DBs
Position
complement(3394696..3395376)
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AA seq
226 aa
AA seq
DB search
MPNKPFQRGDLIGHPFRDPALLTQALTHRSAGAPHNERLEFLGDSIVNMMVAEALYQRWP
KTDEGALTRARAELVREGALALIARTLQLGERLTLGPGEMKSGGHRRDSILADALEAVVA
AIYLDAGFEVCRAVVLPWFSASIEALPASGRPEKDPKTRLQEWLQARQKALPQYELVSES
GDDHAKHFRVRCNVADPAASTEGEGPSRRLAEQQAAAAVLEQLDSK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaataaacctttccaacgtggcgacctgatcggtcatcccttccgcgacccggcg
ctgctcacgcaggcgctgacccatcgcagtgccggcgcgccacataacgagcgcctggaa
ttcctgggcgacagcatcgtcaacatgatggtggccgaagcgctgtaccagcgctggccc
aagaccgacgagggcgcgctgacccgcgcccgcgccgagctggtgcgcgagggggcgctg
gcgctgatcgcccgcacgctgcagctgggcgaacgcctgacgctggggccgggcgagatg
aagtccggcggccaccgccgcgattcgatcctggccgatgcgctggaagccgtggtggct
gcgatctacctggatgccggtttcgaggtctgccgggcggtggtactgccctggttcagc
gcttcgatcgaggcactgccggcctccggccggcccgagaaggaccccaagacccgcctg
caggaatggctgcaggcccgacagaaggcgttgccgcagtacgaactggtgtcagaatcc
ggtgacgaccacgccaaacatttccgggtacgctgcaacgtagctgacccggccgccagc
accgagggcgaaggcccctcgcggcggcttgccgaacaacaggcggctgcggccgtccta
gaacaactggattccaagtga
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