Stenotrophomonas pavanii: STNY_R32660
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Entry
STNY_R32660 CDS
T07567
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00550
Peptidoglycan biosynthesis
spaq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STNY_R32660 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spaq01003
]
STNY_R32660 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spaq01011
]
STNY_R32660 (mrcB)
Enzymes [BR:
spaq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
STNY_R32660 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
STNY_R32660 (mrcB)
Glycosyltransferases [BR:
spaq01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
STNY_R32660 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
spaq01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
STNY_R32660 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BCX45049
LinkDB
All DBs
Position
complement(3543820..3546249)
Genome browser
AA seq
809 aa
AA seq
DB search
MPRRYDSDDIDDFDDDDQQDSGPLWRRRLITWSMAAVALGLGFLIPYTLYLNQQVTQRFG
ELRWQIPTRVYARPLVLTPGKAMDASTLKTELAASAYRDDGQGKEPATYAVNGGRFVIAS
RGYNDVDGRVAPRRVELTLADGGVASLRDADSRKALKAARLDPARIATLYGQKQEERRLI
RMDEAPDLLVTGLQAVEDKDFNRHHGIDLSGIARAVWVTIRSGGQSRQGASTLTQQLARS
GLLGIGKEQTITRKFNEVLYALIMEARYDKRTIFEAYLNQVYLGQRGSQAIHGMSSGAEF
WFGRDLQSLETEQIALLIGLVKGPSFYDPRRNPERALDRRNFVLGKLHEATLIDDAEYQR
ALKAPLGVPKTPGLVAANRFPAYVDLVRRQLGHDYPESALQGAGLSVMTGMSPSAQAYAE
GAVTRTIKSLESKRRPELQAGMVLTDVHNGDVLAVIGSREVSEVGFNRAIEAQRPVGSLL
KPFVYLLALAQPDRYSLASWVDDSPVTVQLGRGRNWSPGNADNRSHGTVRLIDALAHSYN
QATVRVGMQVGPERVTQLIHVLAGIKADANPAVILGSTDQSPYAMAQLYQFLASGGEIQP
LHAVRGVLDPQGKLLKRYDKTPAPAQEGDSIAANLISVGLQQVVASGTAQRLNADGLGRL
QPAGKTGTTNDGRDSWYAGYTGDHLAVIWIGNDQNEQAGLYGATGAMRVWSGIFQRLPSA
PLRVSNKGLDWQSVAPTGLNSTDEGCPGARRFPFVVGYAPAYAPCAPAAPPDGQGEAEGE
GGGWRSWFGLDRKPDAPAEPAAASPPPSR
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgacgctacgattccgacgacatcgacgatttcgacgacgacgaccagcaggac
agcggtccgctgtggcggcgccggctgatcacctggagcatggctgcggtcgcgttggga
ctggggttcctcattccctatacgctgtacctgaaccagcaggtgacccagcgtttcggc
gagctgcgctggcagatcccgacgcgcgtatacgcgcgcccgctggtactgacccccggc
aaggcgatggatgcgtccacgctgaagaccgagctggccgcctcggcctaccgcgatgac
ggccagggcaaggagccggccacctacgcggtgaacggcgggcgcttcgtgatcgccagc
cgcggctacaacgacgttgacggccgggtggccccgcgccgggtggaactgacgctggcc
gatggcggcgtggcctcgctgcgtgacgccgacagccgcaaggcgttgaaggcggcgcgg
ctggatccggcgcgtatcgccaccctctatgggcagaagcaggaagaacgccggctgatc
cgcatggacgaggcgccggacctgctggtgaccggcctgcaggcggtggaggacaaggac
ttcaaccgccaccacggcatcgacctgtccggcatcgcgcgcgccgtgtgggtgacgatc
cgctccggtggccagagccgccagggcgcttcgacgctgacccagcagctggcccgcagc
ggcctgctcggcatcggcaaggaacagacgatcacccgcaagttcaacgaagtgctgtac
gcgctgatcatggaagcgcgctacgacaagcgcaccatcttcgaggcctatctcaaccag
gtgtacctgggccagcgcggcagccaggcgatccatggcatgtcctccggtgccgagttc
tggttcggccgcgacctgcagtcgctggagaccgagcagatcgccctgctgatcggcctg
gtcaagggaccgtccttctacgacccgcggcgcaacccggagcgcgcgctggatcgccgc
aacttcgtgctgggcaagctgcacgaggccacgctgatcgacgacgccgagtaccagcgc
gcactgaaggcaccgttgggcgttcccaagacgccgggcctggtcgcggccaaccgcttc
ccggcctacgttgacctggtccgtcgccagctcggccatgactacccggaatcggcgctg
cagggtgcgggcctgagcgtgatgaccggcatgtcgccgtccgcgcaggcctacgccgaa
ggcgcggtgacccgcaccatcaagtcgctggaaagcaagcgccgccccgagctgcaggcc
ggcatggtgctgaccgacgtgcacaacggcgacgtgctcgcggtgatcggcagccgcgag
gtgtccgaggtcggcttcaaccgcgcgatcgaggcgcagcgtccggtcggttcgctgctc
aagccgttcgtctacctgctggccctggcgcagccggaccgttactcgctggccagctgg
gtcgatgactcgccggtgacggtgcagctcggccgcggtcgcaactggagtcccggcaac
gcggacaaccgcagccacggcacggtgcgcctgatcgacgcactggcgcattcctacaac
caggccacggtgcgcgtgggcatgcaggtcggcccggagcgcgtgacccagctgatccat
gtcctggccggcatcaaggccgacgccaacccggcggtgatcctcggctccaccgaccag
agcccgtacgcgatggcgcagctgtaccagttcctggcgtccggcggcgagatccagccg
ctgcacgcggtgcgtggcgtgctcgatccgcagggcaagctgctcaagcgttacgacaag
acgccggcaccggcacaggaaggcgattcgattgccgccaacctgatcagtgtcggcctg
cagcaggtggtcgccagcggcaccgcgcagcggctcaatgccgacggccttggccgcctg
cagccggccggcaagaccggtaccaccaacgacgggcgcgacagctggtacgccggctac
accggcgatcacctggcggtgatctggatcggcaacgaccagaacgagcaggccggcctg
tatggcgccaccggtgcgatgcgggtctggtcgggcatcttccagcgcctgccgagcgcg
ccgctgcgggtcagcaacaagggcctggactggcagtcggtcgccccgaccggcctcaac
agcaccgatgaaggctgccccggcgcgcgccgtttcccgttcgtggtgggctatgccccg
gcctacgccccgtgtgcaccggccgcgccgccggacgggcagggcgaggctgaaggcgag
ggcggtggctggcgcagctggttcggcctggaccgcaagccggacgcccctgccgagcct
gccgccgcctctcctccgccaagccgatga
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