Stenotrophomonas pavanii: STNY_R32730
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Entry
STNY_R32730 CDS
T07567
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STNY_R32730 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaq03019
]
STNY_R32730 (recQ)
03400 DNA repair and recombination proteins [BR:
spaq03400
]
STNY_R32730 (recQ)
Enzymes [BR:
spaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STNY_R32730 (recQ)
Messenger RNA biogenesis [BR:
spaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STNY_R32730 (recQ)
DNA repair and recombination proteins [BR:
spaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STNY_R32730 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCX45056
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All DBs
Position
3558159..3559964
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AA seq
601 aa
AA seq
DB search
MPSRPAHDLLQRVFGYDDFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQVPALLRDGC
GIVISPLIALMQDQVEALRQLGVRAEYLNSTLDAETAGRVERELLAGELDMLYVAPERLL
TGRFLSLLSRSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQIPRIALTATADPP
TQREIAERLDLQEARHFVSSFDRPNIRYTVVQKDNARKQLTDFLHGHRGEAGIVYCMSRR
KVEETAEFLCGQGFNALPYHAGLPPEVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRF
VAHTDLPKSMEGYYQETGRAGRDGESAEAWLCYGLGDVVLLKQMIEQSEAGEERKQLERA
KLDHLLGYCESMQCRRQVLLAGFGETYPQPCGNCDNCLTPPASWDATIPAQKALSCVYRS
GQRFGVGHLIDILRGSENEKVKQQGHDKLSTYGIGRDLDARTWRSVFRQLVAASLLEVDS
EGHGGLRLTDASRDVLTGRRQISMRRDPASSSSGRERSAQRTGLSVLPQDLALFNALRGL
RAELAREQNVPAFVIFHDSTLRNIAEQRPTSLDALARVGGIGGTKLSRYGPRLVEIVREE
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccgtcccgcgcacgacctgctccaacgcgtctttggttacgacgatttccgt
ggtccccagcaggacatcgtggagcacgtcgctgccgggcacgatgccctggtgctgatg
cccaccggcggcggcaagtcgctgtgctaccaggtaccggccctgctgcgtgacggttgc
ggcatcgtcatctcgccgctgatcgcgctgatgcaggaccaggtcgaagccctgcgccag
ctgggcgtgcgtgccgagtacctgaattcaaccctggatgccgagaccgccggccgcgtc
gagcgcgaactgcttgccggcgagctggacatgctctatgtcgcccccgaacggctgctg
accggccgcttcctgtcgctgctgtcgcgcagccgcatcgccctgttcgccatcgacgaa
gcgcactgtgtgtcgcagtggggccatgatttccgccccgagtaccgccagctgaccgtg
ctgcacgagcgttggccgcagatcccgcggatcgcgctgaccgccaccgccgatccgccg
acccagcgcgagatcgccgagcgcctcgacctgcaggaagcgcgccacttcgtcagttcc
ttcgaccgccccaacatccgctacaccgtggtgcagaaggacaatgcccgcaagcagctg
accgatttcctgcatggccatcgtggcgaggccggcatcgtctactgcatgtcgcggcgc
aaggtcgaggagaccgccgaattcctctgcggccagggcttcaacgccctgccctaccac
gccggactgccgccggaggtgcgcgccaacaaccagcgccgcttcctgcgcgaggacggc
atcgtgatgtgcgccaccatcgccttcggcatgggcatcgacaagccggacgtgcgcttc
gttgcgcacaccgacctgcccaagtcgatggagggctactaccaggagaccggccgcgcc
ggccgcgatggtgaatccgccgaagcatggctgtgctacggcctgggcgatgtggtgctg
ctcaagcagatgatcgagcaatccgaggccggtgaagaacgcaagcagctggagcgggcc
aagctcgaccacctgctgggctactgcgaatcgatgcagtgccgtcgccaggtgctgctg
gccggcttcggtgagacctatccccagccctgcggcaactgcgacaactgcctgaccccg
ccagcttcgtgggatgcgaccatcccggcgcagaaggcgctgagctgcgtctaccgcagt
ggccagcgcttcggcgtcggccacctgatcgacatcctgcgtggcagcgagaacgagaag
gtgaagcagcagggccacgacaagctcagcacctatggcatcggccgcgacctggatgca
cgcacctggcgcagcgtgttccgccagctggtggcggccagcctgctggaagtggacagc
gagggccacggtggcctgcgcctgaccgacgccagccgcgacgtgctgaccggccggcgc
cagatcagcatgcgccgcgacccggccagcagcagcagcggtcgcgagcgcagtgcgcag
cgcaccggcttgtcggtgctgccgcaggacctggccctgttcaacgcgctgcgcggcctg
cgcgccgaactggcacgcgaacagaacgtgccggccttcgtgatcttccacgacagcacc
ctgcgcaacatcgccgagcagcgcccgaccagcctggatgcgctggcccgggtcggcggc
atcggcggcaccaagctgagccgttacggcccgcgcctggtcgagatcgtgcgcgaggaa
ggataa
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