Stenotrophomonas pavanii: STNY_R33490
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Entry
STNY_R33490 CDS
T07567
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
STNY_R33490 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spaq01007
]
STNY_R33490 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spaq03016
]
STNY_R33490 (aspS)
03029 Mitochondrial biogenesis [BR:
spaq03029
]
STNY_R33490 (aspS)
Enzymes [BR:
spaq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
STNY_R33490 (aspS)
Amino acid related enzymes [BR:
spaq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
STNY_R33490 (aspS)
Transfer RNA biogenesis [BR:
spaq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
STNY_R33490 (aspS)
Prokaryotic type
Other AARSs
STNY_R33490 (aspS)
Mitochondrial biogenesis [BR:
spaq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
STNY_R33490 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BCX45131
LinkDB
All DBs
Position
complement(3619631..3621382)
Genome browser
AA seq
583 aa
AA seq
DB search
MRTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEADNAEVFAVA
ASLGYEDVLQVEGVVRARHAVNDKMRTGKVEVIATAITVLNKAAPLPFHAHENPGEETRL
KYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVPARM
HPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQLEFTQLDMEFAFVRER
DVQDFVEDMIRAIFKEVVDVELDASFPRMTWAEAMRRYGSDKPDLRIALELVDVAELVKD
SEFPVFTGPANDAEGRVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAYIKIADNGEVS
SPIQKFFSEERFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGKDFGLVAGGWA
PLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAVSRGYDMVLNGNEIGG
GSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAFGIDRIAALMAGT
ESIRDVIPFPKTTGAQDLMTDAPSPIVDAQLAEVHIQVRPKTN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccacttctgcggcctggtcgacgagaccctgattggccagactgtcaccctc
gccggctggaccgacgtggcccgtaaccagggcggcgtctgcttcatcgatctccgggat
catgaaggcatcgtgcaggtgaccgtggaggccgacaacgccgaagtgttcgccgtggcc
gcgtcgctgggctacgaggacgtactgcaggtggaaggcgtcgtgcgcgcccgccacgcg
gtgaacgacaagatgcgcaccggcaaggtggaagtgatcgccacggccatcaccgtgctg
aacaaggccgcgccgctgccgttccacgcccacgagaacccgggcgaggaaacccgcctg
aagtaccgctacctggacctgcgccgcccggaaatgcagcgcatgcagcgcacccgcatc
aagctggtgcaggccctgcgccgccacctggacgaaaagggcttccaggacatcgagacc
ccgatcctgaccaaggccaccccggaaggcgcacgcgacttcctggtgccggcgcgcatg
cacccgggcgagttctacgccctgccgcagagcccgcagctgttcaagcagatcctgatg
gtggccggattcgaccgctactaccagatcgcgcgctgcttccgcgacgaagcgctgcgc
gccgaccgccagctggaattcacccagctggacatggagttcgccttcgtccgcgagcgc
gacgtgcaggacttcgtcgaggacatgatccgcgccatcttcaaggaggtggtcgatgtc
gagctggatgccagcttcccgcgcatgacctgggccgaggcgatgcgtcgctatggttcg
gacaagccggacctgcgcatcgcgctggaactggtcgatgtggctgaactggtcaaggac
agcgagttcccggtgttcaccggcccggccaacgatgccgaaggccgcgtcgccgcgctg
cgcatcccgggcggcgcgtcgctgagccgcaagcagatcgacgagtacgccgcgcatgcc
gccaagtacggcgccaagggcctggcttacatcaagatcgccgacaacggcgaagtcagc
tcgccgatccagaagttcttcagcgaagagcgcttcgccgcgctggtggcccatgtcggt
gccggcaacggcgacatcgtgttcttcggtgccggtggctacaacaaggtctccgacttc
atgggcgcgctgcgcctgaaggccggcaaggacttcggcctggttgccggcggctgggcg
ccgctgtgggtcaccgacttcccgatgttcgagtgggacgaggaagaacagcgctacgtc
gccctgcatcaccccttcaccgcaccggccgtggacgatatcgccgacctgcgcgccaac
gcccgtaccgccgtctcgcgcggttacgacatggtgctcaacggcaatgaaatcggcggc
ggttcgatccgtatccaccgtccggacatgcagagtgcggtcttcgaactgctgggcatc
ggtgccgaagaggcccgcgccaagttcggcttcctgctcgacgcgctgaactacggcgcg
ccgccgcacggtggcatcgccttcggcatcgaccgcatcgccgccctgatggccggcacg
gagtcgatccgcgacgtcatcccgttcccgaagaccaccggtgcacaggatctgatgacc
gacgcgccgtcgccgatcgtcgacgcgcagctggccgaagtgcacatccaggttcgcccc
aagaccaactga
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