Stenotrophomonas pavanii: STNY_R34150
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Entry
STNY_R34150 CDS
T07567
Name
(GenBank) rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaq03009
]
STNY_R34150
03016 Transfer RNA biogenesis [BR:
spaq03016
]
STNY_R34150
Ribosome biogenesis [BR:
spaq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STNY_R34150
Transfer RNA biogenesis [BR:
spaq03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
STNY_R34150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
BCX45196
LinkDB
All DBs
Position
complement(3698620..3699453)
Genome browser
AA seq
277 aa
AA seq
DB search
MNNPWNNRRPSARPPRATPLPRPEVPATGGGGRGGSDELRLYGLNAVLAAFEARPQALRK
LYLLEARIPRLQPLLKWCVANRVGYRVVEDGDLNKLAGTTHHEGVVADVLRAPALPLAQW
LEQVGDGPALALWLDGVGNPHNLGAILRSAAHFGAKALLLPAGSTLALSGAAARVAEGGA
EAVPLVQLPETAQAMAQLRAAGFGLAATLVEGGDDVFRTALPQRLVYVMGAEGEGMDRGL
AGACDLQVSIPGSGAVESLNVASATAVLLARWASRRS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacccttggaacaaccgccgcccgtccgcccgtccgccgcgcgcaacgccgttg
ccgcgtccggaggtgccggccacgggcggtggtgggcgcggtggcagcgacgagctgcgc
ctgtacggcctcaatgccgtgctggccgcgttcgaagcgcggccgcaggcgctgcgcaag
ctgtacctgctggaggcgcgcattccgcgcctgcagccgctgctgaagtggtgcgtggcc
aaccgcgtggggtatcgcgtggttgaagacggcgatctgaacaagcttgccggcaccacc
caccacgaaggcgtggtggctgacgtgctgcgcgcaccggcactgccgctggcgcagtgg
ctggagcaggtcggtgacggtccggcgctggcgttgtggctggatggcgtgggcaacccg
cacaacctcggcgcgatcctgcgctcggccgcgcacttcggtgccaaggcgctgctgctg
ccggccggcagcacgctggcgctgtccggtgccgccgcgcgcgtggccgagggcggtgcc
gaggcggtgccgctggtgcagctgccggagaccgctcaggcgatggcacagctgcgtgcc
gccggtttcggcctggccgcgaccctggtggagggcggtgacgacgtgttccgcaccgcg
ctgccgcaacgcctggtgtatgtgatgggtgccgaaggcgagggcatggaccgtggcctg
gcgggtgcgtgcgacctgcaggtctcgattcccggcagcggcgcggtggagagcctgaac
gtggcctcggccacggcggtgctgctggcgcggtgggccagccgccgcagctga
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