Stenotrophomonas pavanii: STNY_R34800
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Entry
STNY_R34800 CDS
T07567
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spaq03012
]
STNY_R34800 (selB)
Translation factors [BR:
spaq03012
]
Eukaryotic type
Elongation factors
STNY_R34800 (selB)
Prokaryotic type
STNY_R34800 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
WHD_2nd_SelB_bact
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
BCX45261
UniProt:
A0A246KZF4
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All DBs
Position
3781380..3783308
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AA seq
642 aa
AA seq
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MIVGTAGHIDHGKTRLVRALTGIETDRLQEERTRGISIELGYAYVPVEGSVGDASATLGF
VDVPGHERFVHTMVAGATGIDMALLVIAADDGVMPQTREHLAILQLLGVDRGAVALTKID
RVDAARMAQVQTEIAALLAGTPLQDAPVFACNSTSPDDVGINALRTHLHACATDEFNARR
AALHHELFRMPVDRVFSLAGHGTLVTGAVHGGVASVGEHLQLMPAATDVRVRSIHAQNRA
SERAMAGQRCALNLAAIAREDIHRGDWIADPRALLATLRVDVRLRISAQAAPLRDWAPLH
IHWGTMHRQAHLVLLEDAPSGDGQLVQLVFDSPVCAMCGDRFIARDSAATHTLGGGIVLD
PEPPQRRRRSPARLAWLRALEQLAAGAGLGPLLQQAPLGIPMATLQRYCRRAADRIDLPA
DTRRIVTREDTVVILASHWQVLREQVIASLRSWHERRPDEPGVDSGRLQRSTLPALATGL
WNALLQDLLADGTLQRVGAWWRLPGHDHAPPERERLLLERVLPHLHAGGFDPPWVRTLAT
DFGLPEDEVRAILRRAAARGELFQVVPDLFYAPARIAELAAIVARLSQASGTVDAAAFRD
AIGLGRKRSIQILEFFNRVGYTRRVGDQHRPRGDLQWNAAHD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcggcaccgccgggcatatcgaccatggcaagacgcgcctggtgcgggcactg
accggcatcgaaaccgatcgcctgcaagaagagcgcacgcgcggcatctccattgaactg
ggctatgcctatgtcccggtggagggctcagttggagacgcgtcggcgacgctgggtttc
gtcgacgtaccaggccatgaacgcttcgtgcatacgatggtggctggtgctaccggcatc
gacatggcgctgctggtgattgccgccgacgacggtgtgatgccacagacccgcgagcac
ctggcgatcctgcagttgctgggcgtggatcgcggcgcagtggcgctcaccaagatcgac
cgggtggacgccgcgcgcatggcccaggtccagaccgagatcgctgcactgctggccggc
acgccgctgcaggatgcgccggtgttcgcctgcaacagcacctcccccgatgatgtgggc
atcaacgcattgcgcacccacctgcatgcatgcgccacagacgagttcaacgcgcgacgg
gccgcgctgcaccatgaactgttccgcatgccggtggaccgcgtgttctcattggccggc
cacggcacgctggtgaccggcgcggtgcatggcggcgtcgcctcggttggcgaacatctg
cagctgatgccggcggccaccgatgtgcgcgtgcgcagcatccacgcgcagaaccgggcc
agcgaacgtgcgatggccgggcagcgctgcgcgttgaacctggctgccatcgcgcgcgaa
gacatccaccgtggcgactggatcgccgatccacgcgccctgctggccaccctccgtgtc
gacgtacggctgcggatttccgcgcaggccgcaccgttgcgcgactgggcaccgctgcat
atccactggggcacgatgcaccggcaggcccatcttgtgttgctggaggacgctccctcc
ggcgacgggcagctcgtgcagctggtattcgattcgccggtctgtgcgatgtgcggtgat
cgcttcatcgcccgtgattcggcggccacccacacgctgggcggcggcatcgtgctcgat
ccggagcctccgcagcggcgccggcgcagcccggcacggctcgcctggctgcgcgcactg
gagcaactggccgcaggtgccgggctcggtccgctgttgcagcaggcgcccttggggata
cccatggccacactgcagcgctactgccggcgcgcggccgaccgcatcgatcttcctgca
gacacacgacgcatcgtcacccgcgaagacacggtggtcatcctcgcctcgcactggcaa
gtgctgcgcgagcaggtaattgcctcactgcgcagctggcacgagcgacgcccggacgaa
cccggtgtcgacagcgggcgcctgcaacgcagcaccctgcccgcgcttgcgacggggctc
tggaatgcgctgctgcaggacctgctggccgacggcacgctgcagcgcgtgggcgcgtgg
tggcgcctgcccggtcacgaccatgcgccgccggagcgtgaacgcctgctgctggaacgc
gtgctcccgcacctgcacgccggtggtttcgatccgccgtgggtgcgtaccctggccacc
gacttcggcctgcccgaggacgaggtccgcgccatcctgcggcgtgccgccgcgcgcggc
gaactgttccaggtggtaccggacctgttctatgcgccggcccgcatcgccgagctggcc
gcgatcgtcgcacggctgtcgcaggccagcggtacggtggatgcggccgccttccgcgat
gcaatcggcctggggcgcaaacgcagcatccagatcttggagttcttcaatcgcgttggc
tacactcgacgcgtcggtgaccagcatcggccgcgcggcgacctgcagtggaacgcggcc
cacgactga
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