Stenotrophomonas pavanii: STNY_R35580
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Entry
STNY_R35580 CDS
T07567
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00540
Lipopolysaccharide biosynthesis
spaq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
STNY_R35580 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spaq01005
]
STNY_R35580 (waaA)
Enzymes [BR:
spaq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
STNY_R35580 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
STNY_R35580 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
STNY_R35580 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
STNY_R35580 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
spaq01005
]
Lipid A
STNY_R35580 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_4_4
Glycos_transf_1
Glyco_trans_1_2
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
BCX45338
LinkDB
All DBs
Position
complement(3865676..3866974)
Genome browser
AA seq
432 aa
AA seq
DB search
MRKDPVEWILRGLYSVVLYILLPITVYHLVWRGFRVREYFRRWDERYASYPQPTGQPRVW
LHAVSVGEVNAAAPLVNALRQQRPDIRWVITTITPTGSERVRALWGDALDHVYLPYDVPG
SVNRFLGHFQPSLALILETELWPNMLFGCRDRGIPVYILNARLSARSLRGYRLLAALIRR
ALRTVTCVAAQSQDDAERFVQLGAEPRQVQALGNLKFDIATPDVQGFVEQFHARVPAARP
VWIAASTHDGEEQAVIDLHRRLRAQHPDLLLLWAPRHPERFPKVEALAREQGWRVATRRV
DQWPHAATDVFVIDTLGELMPFYACAQVAFVGGSLQAIGGHNLLEPAAMGTAAVTGPHLH
NFAEISRRMREAGALLIGEDAQAVGDLLQHLLDDAQAREDMARAGCTLVSNGRGALQRTL
ALVAPHLPPPRG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagaccctgtcgagtggatcctgcgcggcctgtactcggtcgtgctctacatc
ctgctgccgatcaccgtgtaccacctggtctggcgcggcttccgggtccgtgagtacttc
cggcgctgggacgaacgctatgcctcctatccgcagccgaccggccagccgcgggtgtgg
ctgcacgcggtctcggtgggcgaggtcaatgccgccgcgccgctggtcaacgcactgcgc
cagcagcgcccggacatccgctgggtcatcaccaccatcaccccgaccggctccgagcgc
gtgcgcgcgctgtggggcgacgcgctggaccacgtctacctgccatacgacgtgccgggc
agcgtcaaccgcttcctcggccatttccagcccagcctggcgctgatcctggaaaccgaa
ctgtggccgaacatgctgttcggctgccgcgaccgcggcattccggtctacatcctcaat
gcccgcctgtccgcccgctcgctgcgtggctaccggctgctggcggcattgatccgccgt
gcgctgcgcaccgtcacctgcgtggcggcgcagtcgcaggacgatgccgagcgcttcgtg
cagctgggggccgagccccgccaggtgcaggccctgggcaacctgaagttcgacatcgcc
acgccggacgtgcagggcttcgtcgaacagttccatgcgcgggtaccggccgcacgcccg
gtgtggatcgccgccagtacccacgatggcgaggagcaggcggtgatcgacctgcaccgc
cgcctgcgcgcgcagcatccggacctgctgctgctgtgggcgccgcgccatcccgagcgg
ttccccaaggtggaagcgttggcgcgcgaacagggctggcgcgtggcgacccgccgcgtg
gaccagtggccgcacgcggccaccgacgtgttcgtcatcgatacgctcggcgagctgatg
ccgttctatgcctgcgcgcaggtcgccttcgtcggcggcagcctgcaggccatcggtggc
cacaacctgctggagcccgcggcgatgggaacggcggcggtgacgggcccacacctgcac
aacttcgcggaaatctcccggcgcatgcgcgaggccggcgcgctgctgatcggcgaggac
gcgcaggcggtgggcgatctgctgcagcacctgctcgacgatgcgcaggcgcgcgaagac
atggcccgcgcgggctgcacgctggtcagcaatggccggggcgcgctgcagcgcacgctg
gccctggtcgcgccgcacctgccgccgccgcgcgggtga
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