Stenotrophomonas pavanii: STNY_R36890
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Entry
STNY_R36890 CDS
T07567
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq00300
Lysine biosynthesis
spaq00470
D-Amino acid metabolism
spaq01100
Metabolic pathways
spaq01110
Biosynthesis of secondary metabolites
spaq01120
Microbial metabolism in diverse environments
spaq01230
Biosynthesis of amino acids
Module
spaq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STNY_R36890
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STNY_R36890
Enzymes [BR:
spaq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
STNY_R36890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
BCX45469
UniProt:
A0A246L375
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All DBs
Position
complement(4017938..4018789)
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AA seq
283 aa
AA seq
DB search
MSKAGSRALRFSKMHGAGNDFVVIDLRDGTAPPTPELAARLADRHIGVGCDQILTIEAAR
ADGSVASYRIWNADGSNSEQCGNGARCIAAWLVREGSAQGDTFVIDSPLASHEVKVLGGG
QFAVTMGVPAFEPANVPLVGFAHPREEYLLPLQGESVRFAAVSMGNPHAVIEVGLIDAAP
VERVGALLQQHASFPRSVNVGFAQVMGPAHARLRVFERGVGETLACGSGACAAAVTLMQR
GRLQRDARISLPGGDLRIQWPGEGQPVVMAGPTAFVFEGEWVA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggccggttccagggccctgcgcttcagcaagatgcatggcgcgggcaatgat
ttcgtagtgattgatctgcgtgacggcaccgcgccgcccacgcctgaactagccgcgcgc
ctggccgaccgccacatcggcgtcggctgcgaccagatcctgaccatcgaggcggcgcgt
gcggacggttcggtggcctcgtaccgcatctggaatgccgacggttccaactccgaacag
tgcggcaacggtgcgcgctgcatcgcggcctggctggtgcgcgaaggcagtgcgcaaggc
gatacattcgtcatcgacagcccgttggccagccatgaagtgaaggtgctgggcggtggc
cagttcgccgtgaccatgggggtgcccgcgttcgagccggccaacgtaccgctggtgggc
tttgcccacccgcgcgaggaatacctgctgccgctgcagggcgagagcgtacgcttcgcc
gcagtgtcgatgggcaacccgcatgccgtgatcgaagtgggcctgatcgatgccgcaccg
gtcgagcgcgtgggtgcgctgctgcagcagcacgcgtcgttcccgaggtcggtgaacgtg
ggctttgcccaggtcatgggcccggcgcacgcccgcctgcgcgtgttcgagcgcggcgtc
ggcgaaaccctggcctgcggcagtggcgcctgcgccgccgcggtgaccctgatgcagcgc
ggccgcctgcagcgggatgcccgcatcagcctgcccggcggcgacctgcgcatccagtgg
ccgggcgagggccagccggtggtgatggccggcccgaccgcattcgtcttcgaaggggag
tgggtggcatga
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