Stenotrophomonas pavanii: STNY_R37530
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Entry
STNY_R37530 CDS
T07567
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq02020
Two-component system
spaq02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STNY_R37530
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
STNY_R37530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spaq02035
]
STNY_R37530
Bacterial motility proteins [BR:
spaq02035
]
Flagellar system
Chemotaxis proteins
MCPs
STNY_R37530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP_N3
MCP-like_PDC_1
HAMP
HAMP_2
dCache_1
Laminin_II
McpB_HAMP_2
DUF1664
Motif
Other DBs
NCBI-ProteinID:
BCX45533
LinkDB
All DBs
Position
complement(4085725..4088256)
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AA seq
843 aa
AA seq
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MPSSRSAAARRPGSIAHKLMLGTAAIALLCFGLTAFLIYRQASTSLINASRQTMTSEATA
EARQVAADLGTAFASNDAMVESVLAQRARGDVPDRASLAAVLGEQLRSHPEWLGKSTMWE
ADAFDGKDAEFVNTEAHDATGRYMSYWAWQEGKPQQSVMTDYTETASGSGDWYMGPSRDK
LPKVSEPYAYDIAGQQVLMSTLSTPIIENGRFLGVFTVDFSLAALQKHLATLKPMGAGRV
ELLSPKGVVLASANAAEIGKPRSDALTRSMLAEIAADRPFEAFSPDAAGNVRVYVPLRVG
DAPQRFALGVVVPHAVIVAEARQLLWLTLLVGVVAALTLSAGVYVLLRRLAIRPLAEAVR
VAGDVAAGKLDSALPARSNDEVGRLLDAMQGMRGQLQSVMAAQAEMARRHDAGELSYRMD
AAAFPGEYGRMVADSNQLVASSNAVTQRLVDVMQRYAVGDLSVDMEALPGEKAVFTAAMA
TTKHNLAAINEQIQQLAAAAAAGDFAVRGDALRFDHDFRRMVETLNTMMEVSDHNLAALS
TLLRAIAAGDLSTRMQGDFHGVFAVMRDDANSTVQQLTQIVGQIQQSAASIRLAAGEIAA
GNSDLSRRTEQQAANLEETAASMEELTSTVRQNAEHALQANTLAGSAAGVASEGGQVVSQ
VVHTMEQIEASSQRIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRAL
AQRSAGAAKEIKALIDASVAQVGAGAQLVHGAGRTMQDIVGQVGRVNEIMAEISAASREQ
SAGIEQVNQTVVQMDETTQQNAALVEEASAAARAMEEQAEQLAVAVSRFRLQAEPAVVAR
RAA
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttcccgttccgccgctgcccgccgcccgggcagcatcgcccacaagctgatg
ctgggcaccgccgccatcgcactgctgtgcttcggcctgaccgcgttcctgatctatcgc
caggccagcaccagcctgatcaatgcctcgcggcagaccatgaccagcgaggcgaccgcc
gaagcgcgccaggtggcggccgatctgggcaccgccttcgccagcaacgatgccatggtt
gaaagcgtgctggcccagcgcgcccgtggtgacgtgcccgaccgcgccagcctggcggcg
gtgctcggcgagcagctgcgcagccatcccgaatggctgggcaagagcaccatgtgggag
gccgatgccttcgacggcaaggatgccgagttcgtcaacaccgaggcgcacgatgccacc
ggtcgctacatgagctactgggcctggcaggagggcaagccgcagcagtcggtgatgacc
gattacaccgagaccgccagcggatcgggtgactggtacatggggcccagccgcgacaag
ctgccgaaagtcagtgaaccgtatgcctatgacatcgccgggcagcaggtgctgatgagc
acgctgagcacgccgatcatcgagaacggcaggttcctgggtgtgttcaccgtcgacttc
tcgctggcagcgttgcagaagcacctggccacgctgaagccgatgggggccggtcgtgtc
gaactgctctcgcccaagggcgtggtgctggcctcggccaatgccgccgagatcggcaag
ccgcgcagtgatgcattgacccgcagcatgctggccgagattgccgccgaccgcccgttc
gaggccttcagccccgatgcggccggcaacgtgcgcgtgtatgtgccgctgcgcgtgggc
gacgccccgcagcgcttcgcgctgggcgtggtggtgccgcacgcggtgatcgtggcagaa
gcgcgccagctgctgtggctgaccctgctggtcggcgtggtcgccgcgctgaccctcagc
gccggcgtgtatgtgctgctgcgccgcctggcgatccgtccgctggctgaagccgtgcgc
gtggccggtgacgtcgcggccggcaagctggacagcgcactgccggcgcgcagcaatgac
gaagtggggcggctgctggacgcgatgcagggcatgcgcggccagctgcagtcggtgatg
gctgcgcaggccgaaatggcgcgccgccacgatgccggtgaactcagctaccgcatggat
gcggcagcgttcccgggcgaatatggccgcatggtggccgacagcaaccagctggtggcc
tccagcaacgccgtcacccagcgcctggtggacgtcatgcagcgttatgccgtgggcgac
ctcagtgtggacatggaagcgctgccgggcgagaaggcggtgttcaccgccgcaatggca
accaccaagcacaacctggccgcgatcaacgagcagatccagcagctggccgccgcggcg
gccgccggtgatttcgcggtgcgcggtgatgcgctgcgcttcgaccatgacttccgccgc
atggtcgaaaccctgaacaccatgatggaggtgagcgaccacaacctggctgcgctgtcc
acgctgctgcgcgcgatcgccgccggtgacctcagcacccgcatgcagggggacttccac
ggggtgttcgcggtgatgcgcgacgatgccaacagcaccgtgcagcagctgacccagatt
gtcggccagatccagcagtcggcggccagcatccgcctggccgccggtgagattgcggcc
ggcaacagcgacctgtcgcgccgcaccgaacagcaggcggccaacctggaagaaacggct
gcgtcgatggaagagctgacctccaccgtgcgccagaatgccgagcatgcgctgcaggcc
aacaccctcgccggttccgcggcgggcgtggccagcgaaggcgggcaggtggtcagccag
gtggtgcacaccatggaacagatcgaagcgtcctcgcagcgcattgccgaaatcatctcg
gtgatcgatggcattgcattccagaccaacatcctggcgctgaacgcagcagtggaagcg
gcgcgcgccggtgagcagggccgtggcttcgccgtggtcgccagtgaagtgcgcgcgctg
gcgcagcgctcggcaggtgccgcgaaggagatcaaggcgctgatcgacgcctcggtggcc
caggtcggtgccggcgcgcagctggtacacggcgcggggcgcaccatgcaggacatcgtc
ggccaggtcggtcgggtcaacgagatcatggccgagatctcggccgcctcgcgcgagcag
tcggccggcatcgagcaggtcaaccagaccgtggtgcagatggacgaaaccacccagcag
aacgccgcgctggtggaggaagccagtgccgccgcgcgtgcgatggaggagcaggccgag
cagctggcggtggcggtgtcgcgcttccggctgcaggccgagccggcggtcgtggcacgc
cgcgcggcctga
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