Stenotrophomonas pavanii: STNY_R38220
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Entry
STNY_R38220 CDS
T07567
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STNY_R38220 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaq03019
]
STNY_R38220 (groL)
03110 Chaperones and folding catalysts [BR:
spaq03110
]
STNY_R38220 (groL)
03029 Mitochondrial biogenesis [BR:
spaq03029
]
STNY_R38220 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spaq04147
]
STNY_R38220 (groL)
Enzymes [BR:
spaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
STNY_R38220 (groL)
Messenger RNA biogenesis [BR:
spaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
STNY_R38220 (groL)
Chaperones and folding catalysts [BR:
spaq03110
]
Heat shock proteins
HSP60 / Chaperonin
STNY_R38220 (groL)
Mitochondrial biogenesis [BR:
spaq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
STNY_R38220 (groL)
Exosome [BR:
spaq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
STNY_R38220 (groL)
Exosomal proteins of other body fluids (saliva and urine)
STNY_R38220 (groL)
Exosomal proteins of breast cancer cells
STNY_R38220 (groL)
Exosomal proteins of colorectal cancer cells
STNY_R38220 (groL)
Exosomal proteins of bladder cancer cells
STNY_R38220 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCX45601
UniProt:
A0A246KWY4
LinkDB
All DBs
Position
complement(4154221..4155870)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDIRFGEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DKAVSAAVAELKNISKPTADDKAIAQVGTISANSDESIGQIIADAMKEVGKEGVITVEEG
SGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKANVDARVAQIKTQIQDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALV
RAITALAGLKGANEDQNHGIQIALRAMEAPLREIVANAGDEPSVIINKVKEGTGSFGYNA
ATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKDEPAMGGAGGMGG
MGGMGGMDF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggatattcgtttcggtgaagacgcccgttcgcgcatggtgcgcggcgtc
aacgttctcgccaatgccgtcaaggccaccctgggcccgaagggccgcaacgtcgtgctg
gaaaagagcttcggcgccccgaccatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactggctgacaagttcgagaacatgggcgcgcagatggtgaaggaagtcgcgtcgcgc
accaacgacgacgccggcgacggcaccaccaccgctaccgtgctggcccaggccctgatc
cgcgaaggcgccaaggccgttgccgccggcatgaacccgatggacctcaagcgcggtatc
gacaaggccgtttcggccgccgtcgccgagctgaagaacatctccaagccgaccgccgac
gacaaggcgatcgcccaggtcggtaccatctcggccaactcggacgagtcgatcggccag
atcatcgctgacgcgatgaaggaagtcggcaaggaaggcgtgatcaccgttgaagaaggc
tcgggcctggacaacgagctggacgtggtcaagggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaaccagcagtcgcagaccgctgacctggatgacccgttcatc
ctgctgcacgacaagaagatctccaacgtccgtgacctgctgccggtgctggaaggcgtc
gccaaggccggcaagccgctgctgatcgtggccgaggaagtcgaaggcgaagcgctggcg
accctggtggtcaacaccatccgcggcatcgtcaaggtcgtggccgtcaaggcgccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaagaagtcggcctgtcgctggaaaaggccaccatcaaggacctgggccgcgcc
aagaaggtgcaggtctccaaggagaacaccaccatcatcgacggcgtcggcgacaaggcc
aacgttgatgcacgcgtggcgcagatcaagacccagatccaggacacctcttcggattac
gaccgcgagaagctgcaggaacgcgtggccaagctggccggcggcgttgccgtgatcaag
gtcggcgcctcgaccgaaatcgaaatgaaggaaaagaaggatcgcgtcgacgacgccctg
cacgccacccgtgcagccgttgaagaaggcgtggtcccgggcggcggcgtggcgctggtg
cgcgcgatcaccgcgctggccggcctgaagggtgccaacgaagaccagaaccacggcatc
cagatcgccctgcgcgcgatggaagccccgctgcgcgagatcgtggccaacgccggcgac
gagccgtcggtcatcatcaacaaggtcaaggaaggcaccggcagcttcggctacaacgcg
gccaccggcgagttcggcgacatgctgcagttcggcatcctggacccgaccaaggtgacc
cgttcggccctgcagaacgcggcctcgatcgccggcctgatgatcaccaccgaagccatg
gttgccgaagctccgaagaaggacgagccggccatgggtggcgccggtggcatgggcggc
atgggtggcatgggcggcatggacttctaa
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