Stenotrophomonas pavanii: STNY_R38570
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Entry
STNY_R38570 CDS
T07567
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spaq03021
]
STNY_R38570 (rpoH)
Transcription machinery [BR:
spaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STNY_R38570 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
KORA
HTH_10
HTH_11
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
BCX45636
LinkDB
All DBs
Position
complement(4191765..4192640)
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AA seq
291 aa
AA seq
DB search
MSQNTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDDEQDLARRFRDGNDLDAAREL
VHSHLRFVVHVARGYNGYGLALGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAEVSAVAKDLNVSEREVMEMES
RLSGRDIGFDAPTDEDNEHAPPSPAAFLVADDEDPSMAYEREDSEDNQMQLLREGLAELD
ARSRDIIRRRWLDADSKVTLQELADEYGVSAERIRQVEANALKKMKALFTA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacacctctactgcccttgtggcaaacaatctcccgattcccagtgcgctc
ggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcggtcgatgac
gaacaggacctggcccgtcgcttccgcgatggcaacgatctggacgccgcccgcgagctg
gtgcattcgcacctgcgcttcgtggtgcacgtggcccgcggctacaacggctacggcctc
gccctgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgcttc
gacccggacatgggcgtgcgcctggtttccttcgcggtgcactggatccgtgccgagatg
cacgagttcatcctgaagaactggcgcatcgtgaaggtcgccaccaccaaggcgcagcgc
aagctgttcttcaacctgcgcaagtcgaagacgcgcctgggctggatgaacgcggcggaa
gtgagcgcggtggccaaggacctgaacgtgtccgagcgcgaggtcatggaaatggagtcg
cgcctgtccggccgcgatatcggtttcgatgcgccgaccgacgaggacaacgaacacgca
ccgccgtcgccggctgcgttcctggtcgccgatgacgaagacccgtcgatggcctacgag
cgcgaggacagcgaagacaaccagatgcagctgctgcgcgaaggcctggcggaactggat
gcgcgttcgcgtgacatcatccgccgtcgctggctggatgccgacagcaaggtgacgctg
caggagctggccgacgagtacggcgtgtcggccgagcgcatccgtcaggttgaagcgaac
gcgctgaagaagatgaaggcgctgttcaccgcgtaa
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