Stenotrophomonas pavanii: STNY_R40040
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Entry
STNY_R40040 CDS
T07567
Name
(GenBank) DeoR family transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spaq03000
]
STNY_R40040
Transcription factors [BR:
spaq03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
STNY_R40040
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
DprA_WH
HTH_Mga
MarR
HTH_5
FaeA
MarR_2
HTH_24
HTH_AsnC-type
PaaX
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BCX45780
LinkDB
All DBs
Position
4352086..4352862
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AA seq
258 aa
AA seq
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MRNTRSRRQQILQLLIEHGSVQVADLVERFGVSAVTIRADLTHFESQGLANRTHGGATLV
RTPPQEQDIHEKDALNLPLKESIGACAARLVQPGDNIIIDSGSTTMTLARHLRAHRDVTV
MTNGLNIAWELANAPGINVLLTGGLLRQQSLSLQGSQAEASLNSYSFDTLFLGVDGLDLQ
FGLTTHDEAEARLNHRMVERARRIVVLTDASKFGRVSLHRIARLDQIHAIITDAGIDDAT
REGLQRLGIDVIIAEPPA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacacccgctcccgccggcaacagatcctgcagctgctgatcgagcacggctcg
gtgcaggtggccgatctggtcgagcgcttcggcgtgtcggcggtgaccatccgtgccgat
ctgacccacttcgagtcgcagggcctggccaaccgtacccacggtggtgccacgctggtg
cgcaccccgccgcaggagcaggacatccacgagaaggatgcgctgaacctgccactgaag
gagtccatcggcgcctgtgcggcgcgcctggtgcagccgggcgacaacatcatcatcgac
tcgggctcgaccacgatgacgctggcccgccacctgcgcgcgcatcgcgacgtgacggtg
atgaccaatggcctgaacatcgcctgggaactggccaacgcgccgggcatcaacgtgctg
ctgaccggcggcctgctgcgccagcaatcgctctcgctgcagggcagccaggccgaagcc
agcctcaactcgtacagcttcgacaccctgttcctgggcgtggatggcctggacctgcag
ttcgggctgaccacccatgacgaagccgaagcccgcctcaaccaccgcatggtcgagcgc
gcgcgccgcatcgtggtgctgaccgacgcctccaagttcggccgcgtcagcctgcaccgc
atcgcccgcctggaccagatccacgccatcatcaccgacgccggcatcgacgacgcaacc
cgcgagggactgcagcggctgggcatcgacgtgatcatcgccgagcctcccgcatga
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