Stenotrophomonas pavanii: STNY_R40720
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Entry
STNY_R40720 CDS
T07567
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
spaq
Stenotrophomonas pavanii
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaq03009
]
STNY_R40720
Enzymes [BR:
spaq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
STNY_R40720
Ribosome biogenesis [BR:
spaq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STNY_R40720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
BCX45848
LinkDB
All DBs
Position
complement(4426783..4427322)
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AA seq
179 aa
AA seq
DB search
MLIAFNKPFNVLCQFTDRSVPPRPTLAGFGLPPRVYAAGRLDHDSEGLLLLTDNGTLAHK
LTDPRHKADKTYWVQVEGTPGDEQLQRLRDGVELNDGPTLPAKIERLDPAPALWTRDPPV
RFRKTVPDSWLAITIREGRNRQVRRMTAAVNLPTLRLVRVSMGPYRLDDLQPGQWRQIG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgccttcaacaagcccttcaacgtgctctgccagttcaccgaccgcagtgtg
ccgccacggccgaccctggccgggttcggcctgccgccgcgcgtgtatgccgccggccgc
ctggaccatgacagcgagggcctgctgctgctgaccgacaacggcaccctggcgcacaag
ctcaccgacccccggcacaaggccgacaagacctactgggtgcaggtggaaggcacgccc
ggtgacgagcagttgcaacggttgcgcgacggggtggaactgaatgacgggccgaccctg
ccggcgaagatcgaacgccttgatccggcccccgcgttgtggacgcgcgatccgccggta
cgcttccgcaagaccgtgcctgacagctggctggcgatcacgatccgcgaggggcgcaac
cgccaggtgcggcggatgacggcggcggtgaacctgccgacactgcggctggtgcgggtg
tcgatgggaccctaccggctggacgacctgcagcccggacagtggcggcagatcggttga
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integrated database retrieval system
