Saprolegnia parasitica: SPRG_00642 Help Entry SPRG_00642        CDS       T04137                                  Name (RefSeq) hypothetical protein   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism spar  Saprolegnia parasitica Pathway spar03018   RNA degradation Brite KEGG Orthology (KO) [BR:spar00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     SPRG_00642  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:spar03019]     SPRG_00642 Messenger RNA biogenesis [BR:spar03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      SPRG_00642 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 HRDC PMC2NT TY-Chap3 Motif Other DBs NCBI-GeneID:  24123277 NCBI-ProteinID:  XP_012194256 UniProt:  A0A067CV47 LinkDB All DBs Position Unknown AA seq 707 aa AA seqDB search MDLPPTYVADLYRHVLLGVKASNAIPSGEDEFHFQYKFNEAFRGQADALGERVTTLLQQL QHVNNKLKSDNDDNDVAVFDPLEENGPLTDLVDSLLEDASKQIERFQKGEVQATPAAATP AAPTAAVTTNAAINKPQEKFADKIDNSDAPFVSKLKTKVHAATVATEQDTTGSDEPYHPY RSEIASLTYQPWQLAPSTEKREMISLEKATYTWVDTEEALAAMLATLSTADILAIDLEHH SYRSYQGFLCLMQISTWDADWLVDTLALRAHLEALNTIFCDPTKLKVLHGADMDILWLQR DFGVYIVNMFDTGQAARCLQYPRFSLKYLLQTHCNVTADKQYQLADWRVRPLDDPLVKYA REDTRYLLFIYENLKRELVSHKSGATNLLHQVYAQSAAVALSVYEKPKVPTFDELFDMAL KLKSTVGLETISDNQAHIFEQLYLWRDTLARALDESPGYVCPNAVLLKIMKGVPTTPAAL FRLCNPVPPLLRKHAHELTLLIAREASAPTTAVAPVALAKKKTTTLLVHEENDQIYGFAG WKVPKRTTTAVVAEASSSLAPAFDMQLEADGHAALEKVRAALAATAFVVVDFMEKTPAPV VAAPAPKEEEEDVYVAPKSLTENYPKLKKRKFESKATKDAAAATAALNPVDEAAPVEASK MDVDAMLKQQEDDKRKKRRAGYNPFVGGKDVVNQKRGYNAPRSSTFR NT seq 2124 nt NT seq  +upstreamnt  +downstreamnt atggacctgccgccgacgtacgtagcggacctctaccgccacgtgctcctgggcgtgaag gcgtcgaatgcgattccgagcggcgaagatgagtttcattttcagtacaagttcaacgag gccttccgcggccaagccgacgcactcggcgagcgcgtcacgacgcttctgcagcagctg cagcacgtcaacaacaagctcaagtcagacaacgacgacaacgatgtcgccgtgtttgac ccgctagaagagaatggcccgctcaccgacctcgtcgactcgctcctcgaagatgcgtcc aagcagatcgagcgcttccagaagggcgaggtgcaggcaacgcccgcggcggcgacaccc gctgcgccaacggcggccgtcacgaccaatgcggcgatcaacaagccgcaggagaagttt gcagacaagattgacaactcggatgcgccgttcgtgagcaagttgaagaccaaggtgcac gccgcgaccgtggccacggaacaggacacgacagggtcggacgagccgtaccacccgtat cgatccgaaattgcatcgctcacgtaccagccgtggcagctcgcgccgtcgaccgagaag cgcgaaatgatctcgctcgagaaggcgacgtacacgtgggtcgacacggaagaggcgctc gcggcgatgctggcgacgctatcaacagccgacatcctcgcgatcgacctcgagcaccac agctaccgctcgtaccaagggtttctctgtctcatgcagatctcgacgtgggacgccgac tggctcgtggacacgctggcgctgcgcgcgcacctcgaggcgctcaacacgatcttttgc gacccgacgaaactcaaggtgctccacggcgccgacatggacattctctggctgcagcgc gactttggcgtgtacattgtcaacatgtttgacacgggccaggccgcgcgctgcctccag tacccgcgcttctcgctcaagtacctcctccagacgcactgcaatgtgaccgccgacaag cagtaccagctcgccgactggcgcgtgcgtccgctggacgacccgctcgtcaagtacgcc cgcgaagacacgcggtacctcctcttcatttacgagaacctcaagcgcgagctcgtgtcg cacaagagcggcgcgaccaatctgctgcaccaagtgtacgcacagtcggccgccgtcgcg ctctccgtgtacgagaagcccaaggtgccaacgtttgacgagctctttgacatggcgctc aagctcaagagcacggtgggcctcgagacgatttcggacaaccaagcgcacatctttgag caattgtacctctggcgcgacaccctcgcacgcgcgctcgacgagtcgccgggctacgtg tgccccaacgcggtgcttttgaagatcatgaagggtgtgccgacaacgcccgccgcgctc ttccgcctctgcaacccggtgccgccgcttctccgcaagcacgcgcacgagctcacgttg ctcattgcgcgcgaagcgtcggcgcccactaccgctgtggctccggtggcacttgcgaag aagaagacgacaacgttgctcgtgcacgaagagaacgatcagatttacggctttgcgggc tggaaggttcccaagcgcacgacgacggcggtcgtcgccgaggcgtcgtcgtcgctggcg ccagccttcgacatgcagttggaagcggacggccatgccgcgctcgagaaggtgcgggcg gcccttgcggccacagcgtttgtcgtcgtcgactttatggagaagacgcccgcgcctgtt gttgcggcaccggcccccaaggaggaagaggaagacgtgtacgtggcgcccaagtctctc acggagaactacccgaagctcaagaagcgcaagtttgagagcaaggcgaccaaggacgcg gccgcagcgacggcggcgctcaaccctgtcgacgaagcggcacctgtcgaagcctccaag atggacgtggatgcgatgctcaagcagcaggaagacgacaagcgcaagaagcggcgggca ggctacaacccgttcgttggcggcaaggacgtggtcaaccaaaagcgcggctacaacgcg ccgcgaagctcgacctttcggtaa

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