Saprolegnia parasitica: SPRG_00940
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Entry
SPRG_00940 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spar04121
]
SPRG_00940
Ubiquitin system [BR:
spar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
SPRG_00940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_8
LRR_RPS2
WHD_2nd_SelB
TFIIE_alpha
Motif
Other DBs
NCBI-GeneID:
24123563
NCBI-ProteinID:
XP_012194542
UniProt:
A0A067D040
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MATQTRILTSLQYSYPPSLKPATWKDAAPPALPLSLVELCVLALVNAEGPAMRGVDMIFP
RLPEELAQSLLAALADKGKVTDDRLSAFLSVSRRVIRLVGCNNIRKSVLRQIPFRCPYLT
YLDLSNCLQVNNTVVQDIMQGCAHLQQLRLDNCRHITDAAFQPEQSLFYPLRACLSLKAL
SFAGCSQVTQALILNLVKAYRSLTQLNFSRCKRINSESIRTLLHGSMTLKTLNLSFMDIA
DEAFASSHAGNTHLLKELDLGQCKITDVALLSLAQSCPDLEVLRLRWCTQITDLGMVRIA
THCRRLRHLDLNNCGFVTDQTVLALAQHCTNLRWLNLSWCVHVTDHSMAELVMGCLHLEE
LLVVWCSQLTDETLVALLEHAKKLKCVHLNGCKDNMSPARLDEVRAHGIQIAS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcagacgcgcatcttgacgagcctccagtacagctacccgccttcgctcaag
ccggcgacgtggaaggatgcggcgccgcccgcgctgccgctgagcctcgtcgagctctgc
gtcctcgcgctcgtcaacgccgagggcccggccatgcgtggcgtcgacatgatctttccg
cggttgccggaagagctcgcccagtcgcttttggcggccttggccgacaaaggcaaggtg
accgacgaccgcctctcggcgttcttgtccgtgtcgcgccgcgtgattcgcctcgtgggc
tgcaacaacattcgtaagtccgtgctgcgccaaatcccatttcggtgcccgtacctgacg
tatctcgatctctccaactgcctccaagtaaacaacacggtcgtccaagacattatgcag
ggctgtgcccacctgcagcagctgcgtctggacaactgccgccacatcacggatgcagct
ttccagcccgagcagtcgctcttttacccgctgcgtgcctgcctgtcgctcaaggcgctg
agctttgcgggctgctcgcaagtgacgcaagcgctgatcctgaacctcgtcaaggcgtac
cggtcgctcacgcagctcaacttttcccgctgcaagcgcatcaacagcgagtcgatccgc
acgctgctgcatggctcgatgacattgaaaacactcaacctctccttcatggacattgca
gacgaagccttcgcgtcgtcgcacgctggcaacacacaccttctcaaggaactggacctc
ggtcagtgcaagatcacggacgttgctctcttgtcgctcgcgcagtcgtgtcccgacttg
gaagtgctgcgtctgcgctggtgcacgcagatcaccgacttgggcatggtgcgcattgcg
acacactgccgccgcctacgccacctcgacctcaacaactgtggctttgtcaccgaccag
accgtcctcgcgctggcgcaacactgtacgaacctccgctggctgaacctctcgtggtgc
gtccacgtcacggaccacagcatggccgagctcgtgatgggctgtctgcatctcgaggag
ctcctggtcgtgtggtgtagccagctcacggacgagaccttggttgcgctcctggagcac
gccaagaagctcaagtgcgtgcacttgaacggctgcaaggacaacatgtcacctgcgcgc
ttggacgaggtgcgcgcgcatggcattcagattgcgtcctag
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