Saprolegnia parasitica: SPRG_01049
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Entry
SPRG_01049 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
spar
Saprolegnia parasitica
Pathway
spar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SPRG_01049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spar03400
]
SPRG_01049
DNA repair and recombination proteins [BR:
spar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SPRG_01049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
NELF-A_N
Motif
Other DBs
NCBI-GeneID:
24123661
NCBI-ProteinID:
XP_012194640
UniProt:
A0A067D8K4
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MEDETYMDEATSGVVMAVNIRHKKTQNEVGVAVRRPRARNSCVRNADGEDKNQWELVLYA
FTDCNQLSTLDNLLVQVSPTECIVSDTTNDTEAKPLRLLLQAHSIERVVAPKARFKHVAS
VMETHLCRLLGVSSVLASHRHELEMDLAMGALACVLESLSVLTDADGFGTYSLSIGDMDS
FLQLDRAALTALNLLPDPLLAGNTTISNGSILELLNRGKTAMGKRLLERWIRMPLVDADQ
IAARQDVVELFVDESSLRMELLDECMKSMPDLEKLALALDKQKNVKLDALVAVYDAAKYV
FPRVLAAIRPHDRLQASFTTPLAKVVDDCAGYISLIEELVDLNARPHVTVNAKHDPALME
LKRSMQETEAEIQDEHERARDDIGGDIKCEKDKVRGFVFRIIDKKQEERVSKVPGVHICQ
VLTNGFYFVTPTLKALAKDHMGFVKEYEVRQAHILSAAIEVAATYVPVVESAAKLVAALD
VLLGFAHVASHASYCRPVLGTSAVALQHARHPCVELQDGVEFIPNNIEMDAKSSRFQLLT
GPNMGGKSTYIRSLGAIAVMAQIGSFVPASSAMLPIMDRLLVRVGAGDMQQRGVSTFMLE
MLEASVICKKATAKSLVIIDELGRGTSTYDGFGLAWAISEHLLARGCWCVFATHFHELTA
LATGQTHAGIVNKHVTAVTTSDAIAMVYEVRDGPCLESFGIYVAEMAGFPKDVVAHAKRK
AKELEHFEMPNPRKKKTRADPVGFRAAFASLPLSTMSDADVVAAVNQLLDA
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagacgtatatggacgaggcgacgtcgggcgtcgtcatggcggtcaacatc
cgccacaagaagacgcagaacgaggtcggcgtcgccgtgcgccggccccgcgcccgcaac
tcgtgcgtccgcaacgctgacggcgaggacaagaaccagtgggagcttgtcctgtacgcg
ttcacggactgtaaccagctctcaacgctcgacaaccttctcgtgcaggtgagcccgacc
gagtgtatcgtctcggacacgaccaacgacaccgaggccaagccgctgcgcctgctgcta
caggcccactcgatcgagcgcgtcgtcgcacccaaggcccgcttcaagcacgtggcgtca
gtcatggaaacccacctctgtcgcttgctgggcgtctcgtccgttctggcttcgcaccgc
catgagctcgagatggaccttgcgatgggcgcgcttgcctgcgtgctcgagtcgctctcg
gttctcacggacgccgatgggtttggcacgtactcgctctcgattggcgacatggactcg
ttcttgcagctcgaccgcgccgccttgacagcgcttaatctgctgcctgacccgcttctc
gcgggcaacacgaccatctcgaacggcagcatcctcgagcttctcaaccgcggcaagacc
gcgatggggaaacgcctcctcgagcgctggatccgcatgcccctcgttgacgccgaccag
atcgctgcgcgccaagacgtggtcgagctctttgtcgacgagtcgagcttgcgcatggaa
ctcctcgacgagtgtatgaagtcgatgccggacctcgagaagctcgcgctcgcgctcgac
aagcagaaaaatgtcaagctcgacgccctcgtcgcggtctacgacgccgccaagtacgtt
tttccacgtgtgcttgcggccatccgcccgcacgaccgcctccaagcgtcgttcacgacg
ccgctcgccaaggtcgtcgacgactgcgccgggtacatctcgctcatcgaggagctcgtc
gacttgaacgcgcggccgcacgtgaccgtgaacgccaagcacgacccggcgctcatggag
ctcaagcgcagcatgcaagagaccgaagccgagatccaagacgagcacgagcgcgcccgc
gacgacattggcggcgacatcaagtgcgagaaggacaaggtccgcggcttcgtcttccgc
atcatcgacaagaagcaggaggagcgcgtgtccaaagtccccggcgtccacatctgccaa
gtgctcaccaacggcttttactttgtcacgccgacgctcaaggcgctcgcgaaagaccac
atgggctttgtaaaggagtacgaggtgcgccaagcccacattctgtcggcggccatcgag
gtcgcggccacgtacgtgccggtcgtcgagtcggccgcgaagctcgtcgccgccctcgac
gtcctcctcgggtttgcccacgtggcgtcccacgcgagctactgccgcccggtccttggg
acgtcggcggtggcgctccagcacgcgcggcacccgtgcgtcgagctccaggacggcgtc
gagttcattcccaacaacattgaaatggacgccaagagctcgcgcttccagttgctcacg
gggcccaacatgggcggcaagtcgacgtacattcggtcgctcggtgcgattgccgtcatg
gcgcagattggcagctttgtgccggcctcctcggccatgctgccgatcatggaccgcctc
ctcgtgcgcgtgggcgccggcgacatgcagcagcgcggcgtctcgacgttcatgctcgag
atgctcgaggcgtccgtcatctgcaagaaggcgaccgccaagtcgctcgtcatcatcgac
gagctcggccgcggcacgtcgacgtacgatggctttggcctcgcgtgggcgatctccgag
cacctgctcgcgcgcggctgctggtgcgtctttgcgacgcactttcacgagctcacggcg
ctcgcgacggggcagacgcacgccggcatcgtcaacaagcacgtgacggccgtgacgacg
agcgacgcgatcgcgatggtctacgaggtccgcgacggtccgtgcctcgagagctttggg
atttacgtggccgaaatggcgggctttccaaaggacgtggtcgcgcacgccaagcgcaag
gcgaaggagctcgagcactttgagatgcccaacccgcgcaagaagaagacgcgggccgac
ccggtcgggtttcgcgccgcctttgcatcgttgccgctgagcacgatgagcgacgctgac
gtcgtggcggccgtcaaccagctccttgacgcgtag
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