Saprolegnia parasitica: SPRG_01601
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Entry
SPRG_01601 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
spar
Saprolegnia parasitica
Pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_01601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_01601
03009 Ribosome biogenesis [BR:
spar03009
]
SPRG_01601
Enzymes [BR:
spar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPRG_01601
Spliceosome [BR:
spar03041
]
Complex A
U1 snRNP components
U1 related factors
SPRG_01601
Complex B
SPRG_01601
Ribosome biogenesis [BR:
spar03009
]
Eukaryotic type
Pre-60S particles
Helicases
SPRG_01601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
24124183
NCBI-ProteinID:
XP_012195359
UniProt:
A0A067D3M5
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MTMSFKKHDAAPKRKRDEHENAAGKPAKVANTALTASTPAGAAWRAEHSITIHGPTADYA
CPDPVLTFDDTPFSSEIKACFTRAGYTSPTPTQAQSWPIALTKQDMISVAKTGSGKTVGF
LLPSFYHISKNTKPTRDPRILVLAPTRELATQIEAEVKKFSRAKPFVRSACIYGGAPKYM
QIRQIEIGVDCLVATPGRLNDLLELKKVNLRSIEILVLDEADRMLDMGFEPQIRKIIAEI
PTQRQTLLFSATWPKAIQKLAREFLTNPVQVEMGDINMLQANKDIVQNVIMCDESEKHVK
LAELMDKVVKMENPDNKDLTQHVKTIVFFRTKRTCDQFANHYWNDGFAVGALHGDKEQHQ
RTLTMNQFKMGTINLLFATDVAARGLDVKDVGVVINYDMPGGQNGIEDYVHRIGRTGRAG
AKGQAFSLFTKSDTGCAKQLVDILTEAQQEVPADLAALAATKRGNMSRGGNRGPPKSARR
FSGRRF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgtccttcaagaagcacgacgccgcccccaagcgcaagcgcgacgagcacgag
aacgccgccggcaagccggccaaggtcgccaacacggcgctgaccgcgagcactccggcg
ggcgcggcgtggcgcgccgagcactcgatcacgatccacggcccgaccgccgactacgcg
tgcccggacccggtcctgacctttgacgacacgccgttctcgagcgagatcaaggcgtgc
tttacgcgcgccgggtacacatcgccgacgccgacgcaggcgcagtcgtggcccatcgcg
ctgaccaagcaggacatgatctcggtcgccaagacgggctcgggcaagaccgtgggcttt
ctcttgccgtcgttctaccacatctcgaagaacaccaagccgacgcgcgacccgcggatt
ttggtgctcgcaccgacgcgcgagctcgcgacgcagatcgaggccgaggtcaagaagttc
agccgcgccaagccgttcgtgcgctcggcgtgcatttacggcggtgcgcccaagtacatg
cagatccgccagatcgagattggcgtcgactgcctcgtcgcgacgcccggtcgcctcaac
gacctcctcgagttgaagaaggtcaacctccgctcgatcgagatcctcgtcctcgacgaa
gccgatcgtatgctcgacatgggtttcgaaccccagatccggaagatcattgccgagatc
ccgacgcagcgccagacgctgctcttcagcgccacgtggcccaaggcgatccagaagctc
gcgcgcgagttcctcaccaacccggtccaagtcgagatgggcgacatcaacatgctccag
gccaacaaggacattgtgcagaacgtcatcatgtgcgacgagagcgagaagcacgtcaag
cttgccgagctcatggacaaggtcgtcaagatggagaacccggacaacaaggatttgacg
cagcacgtcaagacgatcgtcttcttccgcacgaagcgcacgtgcgaccagttcgccaac
cactactggaacgacggctttgcggtcggcgcgctccatggcgacaaagagcagcaccag
cgcacgctcacgatgaaccagttcaagatgggcacgatcaacctcctcttcgccacggac
gtggcggcgcgcggcctcgacgtcaaggacgtcggtgtcgtcatcaactacgacatgccc
ggcggccaaaacggcattgaggactacgtccaccgcatcggtcgcacgggtcgtgcgggc
gccaagggccaagcgttctcgctcttcaccaagagcgacacgggctgtgccaagcagctc
gtcgatatcctcaccgaggcccagcaagaagtgcccgcggacctcgctgcgttggccgcc
accaagcgcggcaacatgagtcgcggtgggaaccgtggcccccccaagagtgctcgtcgc
ttctctggccgtcggttctag
DBGET
integrated database retrieval system
