Saprolegnia parasitica: SPRG_01780
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Entry
SPRG_01780 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
spar
Saprolegnia parasitica
Pathway
spar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPRG_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spar03400
]
SPRG_01780
DNA repair and recombination proteins [BR:
spar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
SPRG_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
BHD_1
BHD_2
Transglut_core
Rad4
Motif
Other DBs
NCBI-GeneID:
24124361
NCBI-ProteinID:
XP_012195536
UniProt:
A0A067CXB3
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSDDEDEWEDALPSPGDDAADDEWEDVDVPEATETNGGSESEDSDDAEGEAPATTAPIEL
HVQDWAALNAAVNAAANDAPPPSKQPKKVKVKRLTKDEKAQLLVQKKAHLVCLVAREAKI
NALANQTILQSLLRSLLPPEIEDILARHAAKSEKKDLVYLLQHMVKWFRATFVRLPYVAD
ASCSIDASSLLAVFYARAGAEHELICLFTALCRACRLHTRYVVSLDTPNITRRDAPFDAF
FGINSLRETSSLRAWNEVQGATRAWVHVDVSRNLFDTPLEVEKLRGRGTLLPHVVAFDDH
GHRTDVAASYATEWSRTLAMRLDENWYARLIGAGASADNALDVETKKMPLPQSLQAFRNH
PQYVLEKHLGVFQCLHPRKPVGLFKGAPVFERDAVRTLRTKHQWRRRGRQVLETEAPIKR
VAKKKSSGPQVFPPPLDNTMSLFGEWQTLEYVAPPVIDGVVPKNEHGNIELWSDHCLPKG
SVHLQLPRVAKVAKSLGVDFAPAVVGWEVKGGRNVPVLNGIVVAEGVAAMVEDAHAAMQH
ESIEKAIKHNQALIIKRWGTFAQKLLLRKRLRDEYGSGQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgatgaagacgaatgggaggacgcgctcccaagccccggcgacgacgctgcc
gacgacgagtgggaagatgtcgacgtgcccgaggccacagagacaaatggcggcagcgag
agtgaagattcagacgacgctgaaggcgaagcccccgctacgacggcacccatcgagctg
catgtccaggactgggctgccctcaatgcggccgtgaatgctgctgcgaacgacgcgcca
ccaccttcaaagcagccaaaaaaggtgaaagtcaagcgcctaaccaaggatgagaaggcg
cagcttcttgtccagaagaaggcacaccttgtgtgtctagttgcgcgcgaggccaagatc
aacgccctcgccaaccagacgattctgcagtcgcttctgcggtcgctcttgccgccggaa
attgaagacattcttgctcgacacgcggcgaaaagcgaaaagaaggacctcgtctacttg
ctgcagcacatggtcaagtggttccgcgcaaccttcgtgcgactgccgtacgtcgcagat
gcgtcctgctctatcgatgcgtcgtcgctgctcgctgtcttctacgcgcgtgcgggagct
gagcacgagctcatttgcttgtttactgcgctttgccgtgcgtgccgcctccacacgcgc
tacgtcgtgtcgctcgacacacccaacattacccgtcgggatgcgccttttgatgcattc
tttggcatcaatagcctgcgagaaacctcgagcttgcgggcatggaacgaggtccaaggt
gcgactcgagcttgggtgcacgtcgacgtctctcgcaatcttttcgacacgccgctcgaa
gtcgagaaacttcgtggtcgcggcacgctccttccgcacgtcgtcgcgttcgacgaccac
ggacacaggacggatgtcgcggcaagctatgcgacagaatggagtcgaacgctggcgatg
cgtctggacgaaaattggtatgcgcggctcattggcgccggagcgtcagcggacaacgcg
ctggacgtcgaaacaaaaaagatgcccctgccgcagtcccttcaagcgttcaggaaccac
ccacagtacgtcttggaaaagcacctcggcgtcttccagtgccttcacccgcgaaaaccc
gtcggcctcttcaagggcgcgccagtctttgaacgcgacgctgtccgcacgctgcgcacc
aagcaccagtggcggcgtcgcgggcgccaagtgctcgagaccgaggcgccgatcaagcgc
gttgccaagaaaaagtcgtcgggcccccaagtgtttccgccaccactcgacaacacaatg
agcctctttggggaatggcagacattggagtacgtcgctccaccggtcatcgacggtgtc
gtacccaagaacgagcacggcaacattgagctgtggagcgaccactgcctaccgaagggc
agcgtgcacctacaacttcctcgcgtggccaaggtcgccaagtccctcggcgtggacttc
gcgccagccgtcgtcggttgggaggtcaaaggtggtcgcaacgtacccgtcctcaatggt
atcgttgttgccgagggcgtcgctgcgatggtcgaggacgcacacgcggcgatgcagcac
gagtcgatcgagaaggccatcaagcacaaccaagcgcttatcatcaagcgctggggcacg
tttgcgcaaaagcttctcctgcgaaagcggctacgggacgagtacggctcgggacagtaa
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