KEGG   Saprolegnia parasitica: SPRG_01780
Entry
SPRG_01780        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
spar  Saprolegnia parasitica
Pathway
spar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPRG_01780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_01780
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      SPRG_01780
SSDB
Motif
Pfam: BHD_3 BHD_1 BHD_2 Transglut_core Rad4
Other DBs
NCBI-GeneID: 24124361
NCBI-ProteinID: XP_012195536
UniProt: A0A067CXB3
LinkDB
Position
Unknown
AA seq 579 aa
MSDDEDEWEDALPSPGDDAADDEWEDVDVPEATETNGGSESEDSDDAEGEAPATTAPIEL
HVQDWAALNAAVNAAANDAPPPSKQPKKVKVKRLTKDEKAQLLVQKKAHLVCLVAREAKI
NALANQTILQSLLRSLLPPEIEDILARHAAKSEKKDLVYLLQHMVKWFRATFVRLPYVAD
ASCSIDASSLLAVFYARAGAEHELICLFTALCRACRLHTRYVVSLDTPNITRRDAPFDAF
FGINSLRETSSLRAWNEVQGATRAWVHVDVSRNLFDTPLEVEKLRGRGTLLPHVVAFDDH
GHRTDVAASYATEWSRTLAMRLDENWYARLIGAGASADNALDVETKKMPLPQSLQAFRNH
PQYVLEKHLGVFQCLHPRKPVGLFKGAPVFERDAVRTLRTKHQWRRRGRQVLETEAPIKR
VAKKKSSGPQVFPPPLDNTMSLFGEWQTLEYVAPPVIDGVVPKNEHGNIELWSDHCLPKG
SVHLQLPRVAKVAKSLGVDFAPAVVGWEVKGGRNVPVLNGIVVAEGVAAMVEDAHAAMQH
ESIEKAIKHNQALIIKRWGTFAQKLLLRKRLRDEYGSGQ
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgagcgacgatgaagacgaatgggaggacgcgctcccaagccccggcgacgacgctgcc
gacgacgagtgggaagatgtcgacgtgcccgaggccacagagacaaatggcggcagcgag
agtgaagattcagacgacgctgaaggcgaagcccccgctacgacggcacccatcgagctg
catgtccaggactgggctgccctcaatgcggccgtgaatgctgctgcgaacgacgcgcca
ccaccttcaaagcagccaaaaaaggtgaaagtcaagcgcctaaccaaggatgagaaggcg
cagcttcttgtccagaagaaggcacaccttgtgtgtctagttgcgcgcgaggccaagatc
aacgccctcgccaaccagacgattctgcagtcgcttctgcggtcgctcttgccgccggaa
attgaagacattcttgctcgacacgcggcgaaaagcgaaaagaaggacctcgtctacttg
ctgcagcacatggtcaagtggttccgcgcaaccttcgtgcgactgccgtacgtcgcagat
gcgtcctgctctatcgatgcgtcgtcgctgctcgctgtcttctacgcgcgtgcgggagct
gagcacgagctcatttgcttgtttactgcgctttgccgtgcgtgccgcctccacacgcgc
tacgtcgtgtcgctcgacacacccaacattacccgtcgggatgcgccttttgatgcattc
tttggcatcaatagcctgcgagaaacctcgagcttgcgggcatggaacgaggtccaaggt
gcgactcgagcttgggtgcacgtcgacgtctctcgcaatcttttcgacacgccgctcgaa
gtcgagaaacttcgtggtcgcggcacgctccttccgcacgtcgtcgcgttcgacgaccac
ggacacaggacggatgtcgcggcaagctatgcgacagaatggagtcgaacgctggcgatg
cgtctggacgaaaattggtatgcgcggctcattggcgccggagcgtcagcggacaacgcg
ctggacgtcgaaacaaaaaagatgcccctgccgcagtcccttcaagcgttcaggaaccac
ccacagtacgtcttggaaaagcacctcggcgtcttccagtgccttcacccgcgaaaaccc
gtcggcctcttcaagggcgcgccagtctttgaacgcgacgctgtccgcacgctgcgcacc
aagcaccagtggcggcgtcgcgggcgccaagtgctcgagaccgaggcgccgatcaagcgc
gttgccaagaaaaagtcgtcgggcccccaagtgtttccgccaccactcgacaacacaatg
agcctctttggggaatggcagacattggagtacgtcgctccaccggtcatcgacggtgtc
gtacccaagaacgagcacggcaacattgagctgtggagcgaccactgcctaccgaagggc
agcgtgcacctacaacttcctcgcgtggccaaggtcgccaagtccctcggcgtggacttc
gcgccagccgtcgtcggttgggaggtcaaaggtggtcgcaacgtacccgtcctcaatggt
atcgttgttgccgagggcgtcgctgcgatggtcgaggacgcacacgcggcgatgcagcac
gagtcgatcgagaaggccatcaagcacaaccaagcgcttatcatcaagcgctggggcacg
tttgcgcaaaagcttctcctgcgaaagcggctacgggacgagtacggctcgggacagtaa

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