Saprolegnia parasitica: SPRG_02135
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Entry
SPRG_02135 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spar03021
]
SPRG_02135
Transcription machinery [BR:
spar03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
SPRG_02135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
24124698
NCBI-ProteinID:
XP_012196076
UniProt:
A0A067D2S4
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MELPVADATRQDKAAEHDELSALDALIQAALDYKLKGNATNYNLILSKFEKSTDDKERSQ
LFLALPRSISKLTANMDAFHDLVHQIFTFDFMASPIVIEAYIRLLTHLVTAQTAFVQPTI
KVLVRNFLRPTPPTIAAPMKGATRIMTTLGIAIRPVIATAPVVPAVDVLAQFEEQVVARY
KYVHEAFAKVLALVPASIHMVFECICGLFPHKRVETLSQLAFLKNVLHLTTYAKGLQERV
LGLLVEKLVAIDVEIKLDNTEEDVFTMDDFLDDDCCVDPTSDMVDENADKLDNMMLTVFT
HFEQLLATDPTVHTALFTFLLKSFDASVLNTHQSKYPQFLLFYIAKTAPEHQELFLSQLI
SVSLDTKIPPVTRHSCASYLASYVARAKYLPTTAIKHTLFHLLRWIHGQVDLLDGLAPDA
IASAACDPLTTAVIQTACYIVCFRGLELCGSEAGYGFVRSLGWQRILTCPLMPFRQPVFQ
PSVANEFVNVAELLLLIPDESVEQLLLWISTSTASKSSSHGMNLERSIVEKDTSKRACFF
PYDPYLLRRSFRFIGPLYLFWKHADPSWSGNSEAFHLVQSYMLAYDHDGASEDDDDGGDD
DASMAGSFVQSSVSSASFMHGGSFTGSEADMDFYARDHLARSMSIGDEPLAEVTTTTTTF
RLDYHDEEEFGF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagctaccggtcgcggacgccacccggcaagacaaggcggccgagcacgacgagctc
tcggcactcgatgcgctcatccaggccgcgctggactacaagctcaagggcaatgcgacc
aactacaacttgatcttgtccaagtttgagaaatccacggacgacaaagagcgcagccag
ctcttcttggcgctaccgcggtccatctccaagctcacggccaacatggatgcgttccac
gacctggtccaccaaatctttacgttcgactttatggcgtcgccgatcgtcattgaagcg
tacattcgcctcctcacgcacctcgtgaccgcgcagaccgcgttcgtccagcccaccatc
aaggtgcttgtccgcaattttttgcgtccgacgccgccgacaatcgcggcgcccatgaag
ggcgcgacgcgcatcatgacgacgcttggaatcgcgatccgcccggtcattgcgacggcg
cctgtcgttcctgccgtcgacgtcctcgcgcagttcgaggagcaggtggtcgcccgctac
aagtacgtgcacgaagcgttcgccaaggtgctggcgcttgtgccagcctcaatccacatg
gtctttgagtgcatttgtggcctcttcccgcacaagcgtgtcgagacgctaagccagctg
gcctttctcaagaacgtgctgcatctcacgacgtacgccaagggcctccaagagcgtgtg
ctcgggctcctcgtcgagaagcttgtggcgattgacgtggaaatcaagctcgacaatacg
gaagaagacgtgtttacgatggacgatttcctcgatgacgactgctgcgtcgacccaacg
tccgacatggtggacgagaacgccgacaagctcgacaacatgatgctgacggtgtttacg
catttcgagcaactcctcgcgaccgacccgacggtccacacggcgctcttcacgtttctt
ctcaagtcgtttgacgcgagcgtcctcaacacgcaccagagcaagtacccgcagttcctc
ctcttctacattgcaaagacagcgcccgagcaccaagagctcttcctctcgcagctcatt
tcggtctcgctcgacacgaaaattccacccgtgacgcgccacagctgcgcgtcgtatctc
gcgagttatgttgcgcgcgccaagtaccttccgacgacggccatcaagcacacgctcttc
cacctcttgcgctggatccatggccaagtcgacctcctcgacggcctcgccccggacgcg
atcgcctccgcggcctgcgacccgctcacgacggccgtgatccagactgcgtgctacatt
gtgtgctttcgcggcttggagctctgcggctccgaggcagggtacggctttgtgcggtcg
ctgggctggcagcgcattttgacgtgcccgctcatgcctttccgacagccggtcttccag
ccgtcggtcgccaacgagtttgtcaacgtggccgagctcttgctgctcattccggacgaa
agcgtcgagcaactgctgctgtggatctcgacgtcgacggcctccaagtcatcgtcgcat
ggcatgaacctcgagcgctccattgtggagaaggacacgtccaagcgcgcgtgcttcttc
ccgtacgacccgtacttgctgcgccggtcgtttcggttcattgggccgctgtacctcttc
tggaagcacgccgatccgtcctggtcgggcaactcggaagcgttccacctcgtgcagagc
tacatgcttgcgtacgaccacgacggtgcctccgaggacgacgacgacggtggcgacgac
gatgcgagcatggcgggcagctttgtgcagtcgagcgtcagcagcgcgagcttcatgcac
ggcggcagcttcacgggcagcgaagccgacatggacttttacgcgcgggatcacttggcg
cgctccatgagcattggcgacgagccgcttgccgaagtgacgacgacaacgacgacgttc
cgactcgactaccacgacgaagaagagtttgggttttaa
DBGET
integrated database retrieval system
