Saprolegnia parasitica: SPRG_02568
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Entry
SPRG_02568 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_02568
03036 Chromosome and associated proteins [BR:
spar03036
]
SPRG_02568
Enzymes [BR:
spar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
SPRG_02568
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SPRG_02568
Chromosome and associated proteins [BR:
spar03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
SPRG_02568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
DNA_pol_A_exo1
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
MOV-10_Ig-like
PIF1
DEAD
Helicase_RecD
AAA_22
PhoH
AAA_7
UvrD_C_2
AAA_16
AAA
Ig_CFAP65_4th
Motif
Other DBs
NCBI-GeneID:
24125116
NCBI-ProteinID:
XP_012196527
UniProt:
A0A067D299
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MAAKACVDALCTYVQARHGYVRVAELESFYSSTKARKKLKATVADAGGIEAFIAAHGASA
AYPLAVVAHAIQFAATSEAIKALGEAALPNRTTTDIGCFLGGFRKAHPAYGFMWSSAKIA
SCTEFIEIHGCLGQFQLVIVGDKKLLGITWTQQPGSPPPTTSPSASTTATPPAAYKYITT
VQGAKQAFAVLKQSDVLFMDLEGDLEAAGKMSLLQVSCRSDCVYILDVYVCPAILREPEI
VAVLTSKLAVLHDARHDYTGLAGQFNLRLTNLFDTQVAHQVLTSSPNTLVGLNKILHQYA
GAINTQKDSVQHGFGLWDRRPIEAQRLDYAAQDVKHLPAAYARMKSLMTTAMYNEVLAKS
LARAQLGAVPQGAHDAIRRLGKYIVSLGGKLRFSNMGDYYTKHPNDKGVFKPSLAAFLRT
HGPQASPPILVDNDFAWVENDSKPLTVASVLKIVGGFIAENGGRIPGSRLGDLYKEYPGI
SAVIYANGSNASGFVKDHGASATPPIRSTDGDFFVGGASHEAASPANDPSPAKLLKLYGA
KFTADKYGVEIKDNNVFRRVVETKTSATQLYTVTSRATESITLRRVFQVATSKGSTPFKF
GPKIGTNIAFAPNTTLNIPCHFSPKVPGQYKTILAFEFVTRHGTVFFIGRVVEGVNAVDA
GMDAETRDAIASAPVKRQRRKKRTNLHFVPPTGGDKHSAKSTRSKRSVPLAPYPVPSPLP
VVDFEGPLSLVNYQARFRHLLFHEELEHLRQQAEFDMDGARLKVKTPDLYELAVPGLAEG
RPSLMTGDKVWLSRGAKTFQGTVYDVRLDAIYIATPTSFRSAYQASASFNVRFIMSRTPM
REMHQGLASISLAMHETLLFPSPTVPRPVEIQRSLQPTRSINPEQHKVINDVLDHVMSSA
KVKAPYLLFGPPGTGKTVTLVETIVQLLRAKPDAKILVCAPSNAAADNVVERLASQLTRA
KLLRAMAFSRREKGTPDAVLPFTKTNGEGGFTPVTLGDVQAVAVIVSTIGSGAKLYNLGV
ARGYFSLIAIDEAAQASEPEVVTVLGPLALPATVVVLAGDPKQLGPVVKSAVAAKHGLGM
SLMERLMERELYATSHKTKLLRNYRSHDAILTVPNELFYEGELTPHAPKATTHNMLAWPS
LPNAAAPILFHGITGAEMQDADSPSWYNLFELHAVLTYIQSLKTYPGLRLDEIGVITPYA
KQRQKIQMALQKHKLDGVLVGSVEQFQGGERRVILVSTVRSSTEFFADDAKFRLGFVSHP
KRFNVAITRAKALLIVVGNPDILETSSTWGPFLEHCVRLGAIAGAPPRHATAIIKAERAN
DSGNDSDADDDDDDDEYGGNDSDDDDDDYDSDDDVCVQYEIMMAEAAAAHRANVQAEAAA
RAAQVEEERAYQARLRAWEDARARELAPRDQARRRDVYNAVMEQQYRAQLEHEERMYRSV
QAQEHAAMMAAQEAARQAKHDESTSGCSIQ
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaggcgtgcgtggatgctctatgcacctacgtgcaagcacgccatggctac
gtgcgcgtggcagagctcgagtcgttctactcttcgaccaaagcacggaaaaagctcaag
gccactgtcgccgacgccggcggcatcgaagccttcattgcagctcatggcgcgtctgct
gcctatccgctcgccgtcgtcgcgcatgcgattcagtttgctgcgacgtctgaggccatc
aaggctctcggtgaggcggcgttgccgaaccgcaccacaacagacattgggtgcttcttg
ggcggctttcgaaaagctcaccctgcgtatggctttatgtggtcgtccgcgaagatcgct
tcatgcaccgagttcatcgagatacacgggtgtctgggtcaatttcagctcgtaatcgtc
ggggacaagaagctgctcggcatcacgtggacccaacaaccggggtcgccgccgccgacc
acatcgccttcagcatcgacaacggcaacgccgccagctgcgtacaagtacattacgact
gtgcaaggcgccaagcaagccttcgcggtcctcaagcagtcggacgtgctcttcatggac
ctcgaaggcgacttggaggctgctggcaagatgtcgctgctccaggtctcgtgccggtcg
gactgcgtctacattctcgacgtctacgtgtgccctgcgatcttgcgcgagcccgagatc
gtcgccgtgctcacgtccaagctcgctgtcttgcacgatgcgcgccacgactacacgggt
cttgcggggcagtttaacctccgtttgaccaacctctttgacacgcaagtcgcgcaccaa
gtgctgacgagtagccccaacacgctcgtgggtctcaacaagattctgcaccagtacgcg
ggcgccatcaacacgcaaaaggactcggtgcagcatggctttggtctctgggaccgccgc
ccgatcgaagcccagcgcctcgactacgctgcgcaggacgtcaagcaccttccggcggcc
tacgctcgcatgaagagtctcatgacaaccgccatgtacaacgaggtgcttgccaagtcg
ctcgctcgggcgcagcttggcgctgtgccccaaggtgcccacgacgcgatccggcgtctc
ggcaagtacattgtgagtctcggcgggaagttgcgattttccaacatgggtgactactac
accaagcacccgaacgacaagggcgtcttcaagccgtcacttgcagcgttcctccgaacg
cacgggccgcaggcgtccccgcccattcttgtcgacaacgactttgcgtgggtcgaaaac
gactcaaagccgctgaccgtcgcgtcggtgctcaagatcgtcggcggctttatcgctgag
aacggcggtcgcatcccggggtcgcgcctaggcgacctctacaaggagtacccaggtatc
agcgcagtcatatacgcgaacggtagcaatgcgtcgggctttgtgaaggaccacggcgcc
tcggcgacgccaccgattcgctccacggacggcgatttctttgttggcggtgcatcccac
gaggcggcgtcgcccgccaacgacccttcgccggccaagctcctcaagctctacggcgcc
aagtttaccgccgacaagtatggcgtcgagatcaaagacaacaatgtctttcgtcgtgtt
gtcgagaccaagacgtcggcgacgcagctctacaccgtaaccagccgcgcaaccgagtcg
atcacgctgcgccgcgtcttccaagtcgcgacatccaagggcagtacgcccttcaagttt
ggccccaaaatcggcaccaacattgcctttgcacccaacacgaccctgaacattccgtgc
cacttttcgcccaaagtgcccggtcagtacaagacgatcctcgcgttcgagtttgtgaca
cgccacggcaccgtctttttcattggccgcgtcgtcgaaggcgtcaacgccgtcgatgca
ggtatggacgcagagacgcgggacgcgatcgcgtccgcccccgtcaagcggcaacgacgc
aagaagcgcaccaatctgcattttgtgccaccgaccggtggtgacaagcactcggccaag
agcacgagatccaagcgtagtgtgccgttggcaccgtatcccgtcccgtcgccgctgccg
gtcgtggatttcgaaggccctttgagtttggtcaactaccaagcgcgcttccgtcacctg
ctgttccacgaagagctcgagcacctccggcagcaggccgagtttgacatggacggtgcg
cgcctcaaggtcaagaccccagacctctacgagctcgccgtgcctggcctcgccgaaggc
cggccgtcgctcatgacgggcgacaaagtttggctctcgcgtggcgccaagacgttccag
ggcaccgtgtatgatgtgcgtctcgatgcgatttacattgcgacgccgacgtcctttcga
agcgcgtaccaagcgagcgcgagcttcaacgtccgcttcatcatgtcgcggacgccgatg
cgcgagatgcaccaaggcctcgcaagtatctcactggcgatgcacgagacgttgctcttc
ccgtcgccaacggtgccgcgccccgttgaaatccagcggtcgctgcagccaacgcgctcc
atcaaccccgagcagcacaaggtcatcaacgacgtactcgaccacgttatgtcgtcggcc
aaggtcaaggcgccctacttgctctttgggccgccaggcacgggtaaaaccgtgacgctt
gtcgagacgattgtgcagctgctccgagcgaagccggatgcgaagatcctcgtgtgcgca
ccgtcgaacgcggcggccgacaatgttgtcgagcgtctagcgtcgcagctaacgcgcgcc
aagctcttgcgtgccatggcctttagccgccgtgagaaaggcacgccggacgccgtgctt
ccctttaccaagaccaacggcgaaggcgggtttacgcccgtaacgctgggcgatgtccag
gcggtcgccgtcatcgtctcgacaatcgggtcgggcgccaagctctacaacctcggtgtc
gcccgtgggtactttagcttgattgcgatcgacgaggcggcgcaggcgtccgagcccgag
gttgtcacggtgctgggtccgctggctctgccggcgactgtagtggtcctcgcgggggac
ccgaagcagctcgggcccgtcgtcaagtcggctgtggccgccaagcatggcctcggcatg
tcgctcatggaacgactcatggaacgcgagctgtacgcgacgtcgcacaagacaaagctg
ctgcgcaactatcggtcccacgacgccattctgaccgtgcccaatgagctcttttacgag
ggcgagctcacgccgcacgcaccaaaggccacgacgcacaacatgctggcgtggccgagt
ctgcccaacgcggcggcgccaatcctcttccacggcatcacgggcgccgaaatgcaagac
gccgactcgccgtcgtggtacaacttgtttgagctccacgccgtactgacgtacattcaa
tcgctgaagacgtacccaggcttgcgcctcgacgagattggcgtcattacgccgtacgcc
aagcagcgccagaagattcagatggcgctccaaaagcacaagctcgatggtgtcctcgtc
gggtcggtcgagcagtttcaaggtggtgagcgccgtgtcatcctcgtttcgaccgtgcgc
agctcgaccgagttttttgctgacgacgccaaatttcgccttgggttcgtgtcgcacccc
aagcgcttcaacgtcgcgatcacgcgggcgaaagccctcctcatcgtcgtcggtaacccc
gacatcctcgagacgagctcgacgtggggccccttcttggagcactgcgtccgtcttggt
gcgattgcgggcgcgccgcccaggcacgcgacggccatcatcaaggccgagcgcgccaac
gacagcggcaatgacagtgatgccgacgatgacgacgacgacgacgagtatggtggcaat
gacagtgatgacgacgacgacgactatgatagcgacgatgacgtgtgcgtccagtacgag
atcatgatggcagaagctgcggcagcccaccgcgccaacgtgcaagccgaagcagcggcc
cgggcggcccaggtggaagaagagcgagcgtaccaagcccgcttgcgcgcgtgggaagat
gcccgtgcgcgcgagcttgcgcctcgagatcaagcccgtcggcgcgacgtgtacaacgct
gtgatggagcagcagtatcgcgcgcaactcgagcacgaagagcgcatgtaccggagcgtc
caggcgcaagagcacgcggcgatgatggcagcccaggaggctgcccggcaggccaagcac
gacgagtcgacgagcggatgttccatccagtaa
DBGET
integrated database retrieval system