Saprolegnia parasitica: SPRG_02893
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Entry
SPRG_02893 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12850
pre-mRNA-splicing factor 38B
Organism
spar
Saprolegnia parasitica
Pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_02893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_02893
Spliceosome [BR:
spar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SPRG_02893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
DUF4454
Motif
Other DBs
NCBI-GeneID:
24125432
NCBI-ProteinID:
XP_012196870
UniProt:
A0A067D0W8
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MSRSALTRHDAQQAPPMNYAAHAYAMAQQVQHAAYMEGEYAERRAKENELPVHGNATTYN
LNKMLFDNIMQSVYFGQLYALKTYHEVVDEIYYRVDHAEPLSPGTARIPSSCFCLLLKFC
TMRLTHNQMQGLLKHVDSPYIRCVGFLYLRYTMDPEELWAWFEPYLDDAEEFNASANDKI
ITTIGVWLRTLLEEINYFGTILPRIPKKILDGIKIKLLLHDKKKERAAANLAVAELLVKG
TKVRALYADDENEPAMYDAVIDEADEANHVYWVTFPQYGNTEKVGLGDIEFEAPRAPQRS
RSRSRSRDRRRRRSASRDRRRRRSPSYDRRRRSRSRSRDRRPKDDKSLTEDLMEEVRRKE
RRKAEAVGKDYAARPASYKGSLTLKQDRFTTRKRSRSPAKKEYEFVELEKPKETNIPPPQ
APVRMSREAEERRRKLLETYGDAAAKPKKTADH
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggagcgcgctcacccgccacgacgcccagcaggcgccgccgatgaactacgca
gcgcatgcgtacgccatggcccagcaagtgcagcatgctgcctacatggagggcgagtac
gcagagcgccgcgccaaggagaacgagctgcccgtgcatggcaatgcgacgacgtacaac
ctcaacaagatgctcttcgacaacatcatgcaatcggtctactttggccagctctacgcg
ctcaagacgtaccatgaagtcgtcgacgagatctactaccgtgtcgaccacgcagagccg
ctctcgcccggtaccgcgcgcattccgtcgtcttgcttttgcctcctcctcaagttttgc
accatgcgcttaacgcacaaccagatgcaagggctcctcaaacacgtcgactcgccatac
attcgctgcgttgggttcctctaccttcgctacacgatggatcccgaggagctctgggcg
tggtttgagccgtacttggacgacgccgaggagtttaacgcgtcggccaacgacaagatc
atcacgacgattggcgtctggctgcgcacgctcctcgaggaaatcaactactttggtacg
attcttccgcgcatccccaagaagatcctcgatggcatcaagatcaaactgcttttgcac
gacaagaagaaggagcgcgcggccgccaacctcgccgttgccgagttgcttgtgaagggc
accaaggtgcgcgcgctgtacgctgacgacgagaacgagcctgcgatgtacgacgcggtg
attgacgaggcggacgaggccaaccacgtgtactgggtcacgtttccgcagtacggcaac
accgaaaaggtcggccttggcgacattgagtttgaagcgccccgcgcgccccagcggtct
cggtctcgatcgcggtcgcgggaccgtcggcggcgtcggtcggcgtcccgagatcgccgc
cgccgtcggtcgccgtcgtacgaccgtcgtcgtcgaagccgcagtcgcagccgcgaccgt
cgccccaaggacgacaagagcttgaccgaggacctcatggaagaagttcggcgcaaggag
cgccgcaaggccgaagcggtcgggaaagactatgcagcgcgcccggcgagctacaagggg
tcgcttacgctcaagcaagaccgattcacgacgcggaagcggtcgcgcagcccggccaag
aaagagtacgagtttgtcgagctcgagaagccaaaggagaccaacatcccgccgccgcaa
gcgcccgtgcgcatgtcgcgcgaggccgaagagcgccggcgcaagctcctcgagacctac
ggcgacgcggcggctaagcccaagaagacggcagaccactaa
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