Saprolegnia parasitica: SPRG_02970
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Entry
SPRG_02970 CDS
T04137
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
spar
Saprolegnia parasitica
Pathway
spar03018
RNA degradation
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_02970
09123 Folding, sorting and degradation
03018 RNA degradation
SPRG_02970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_02970
03041 Spliceosome [BR:
spar03041
]
SPRG_02970
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SPRG_02970
mRNA degradation factors
5'-3' decay
Lsm complex
SPRG_02970
Spliceosome [BR:
spar03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
SPRG_02970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
24125504
NCBI-ProteinID:
XP_012196942
UniProt:
A0A067CPP6
LinkDB
All DBs
Position
Unknown
AA seq
75 aa
AA seq
DB search
MEKKAPSDFLKSVLGRPVDVKLNNGVEYKGILACLDGFMNIAMEQTQEYVNGQLKAQYGD
CFIRGNNVLYISASK
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaagcgccgtccgacttcctcaagagcgtccttggccgccccgtcgacgtc
aagctcaacaacggcgtcgagtacaagggtatcttggcctgcctcgacggcttcatgaac
atcgccatggagcagacccaggagtacgtcaacggccagctcaaggcgcagtacggcgac
tgcttcatccgcggcaacaacgtcttgtacatctcggcgtccaagtag
DBGET
integrated database retrieval system
