Saprolegnia parasitica: SPRG_03008
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Entry
SPRG_03008 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
spar
Saprolegnia parasitica
Pathway
spar03082
ATP-dependent chromatin remodeling
spar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SPRG_03008
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SPRG_03008
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spar01009
]
SPRG_03008
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spar03021
]
SPRG_03008
03036 Chromosome and associated proteins [BR:
spar03036
]
SPRG_03008
Protein phosphatases and associated proteins [BR:
spar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SPRG_03008
Transcription machinery [BR:
spar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
SPRG_03008
SWI/SNF complex
SPRG_03008
Chromosome and associated proteins [BR:
spar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
SPRG_03008
PBAF complex
SPRG_03008
SWI/SNF complex
SPRG_03008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
HMG_box
HMG_box_2
HTH_31
HTH_3
HTH_37
Motif
Other DBs
NCBI-GeneID:
24125541
NCBI-ProteinID:
XP_012196979
UniProt:
A0A067CPT7
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MSSRALGNDFAHLQQDNAEIERSMLAQEVEALRTRLGLRQVDVSKECGVNASMLSQWMLG
RYKGNIARINGLMEGWLVSRRGGKPLDKSNMAQHAHSSRLSNSDGMDHLQRQQLKRKPAV
QMDQYPLYKYPKSMDASDASLIPIRLDVDVDGYRYIDAFLLSTNESDYTYETLSSSLIKD
LDLPDCFYAPIIESIKAQVAAATKYAPWSSAVKSEALYRIYIKLRINDTILLDTFEWDLH
NPTNDPEQFARVFCSEMGLCGEFELAIAMSIRDQLQQYAKGHLEQQKDQASRLPPVAQPL
RDMDDAKLWEPKIRYVLADDVPVLEREDFKRMRPTSMPAPQPMLPYFPVKPMSYFNTATP
SSVMAAKPNRPPKPVNTFLIFCRQWRKKLMAQNPAASAKEASKLLGDMWQKLTEAQRASY
QPLADKENAQRMLEWKRKEGDKLPAGDFSAAVSQAGTVTPHVPAAFAGTPVSSAGTAAAS
ASPSGDALDELEGENDLDDDDENDEDDEDVDDEDDDDDE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagggcgcttggaaatgatttcgcgcatctgcagcaggacaatgcagagatc
gagcgctcgatgctcgcccaagaggtcgaagcactgcgcacgcgcttgggcctgcgccaa
gtcgacgtgtccaaggagtgtggcgtgaatgcatcgatgctctcgcagtggatgctcggc
cggtacaagggcaacattgcccgcatcaacggcctcatggagggctggctcgtctcccga
cgcggtggcaagccgctggacaagtccaacatggctcagcatgcgcattcgagccgcttg
tccaactcggatgggatggaccatcttcagcgccaacagctcaagcggaagcctgccgtg
caaatggaccagtacccgctgtacaagtacccgaagtcgatggacgcgtccgatgcgtcc
ttgataccgatccgactcgacgtcgacgtcgacggctaccgctacattgacgccttcttg
ctcagcacaaatgaatccgactatacgtacgagacgctctcgtcgtcgctcatcaaggac
ctcgacttgcccgactgtttttacgccccgatcatcgagtccatcaaggcgcaagtggcg
gccgcgaccaagtacgctccgtggtccagcgccgtcaagtcggaggcgctctaccgcatc
tacatcaagctccgcatcaacgacacgatcctactcgacacgttcgagtgggatctccac
aacccgacgaacgatccggagcagtttgcccgcgtcttttgtagcgaaatgggactttgc
ggcgaatttgagctagcgattgccatgtcgattcgggaccagctccagcagtacgccaag
ggccacctcgagcagcagaaggaccaagcgagccggctgccgcccgtcgcccagccgctt
cgcgacatggacgacgccaagctgtgggaaccgaagatccgctacgtcctcgccgacgac
gtgcctgtcctcgagcgcgaggactttaagcgcatgcgaccgacatcgatgccggcgcct
cagcccatgctgccgtactttccggtcaagcccatgtcctacttcaacaccgcgacgccg
tcatccgtgatggcggccaagcctaaccgcccgcccaaacccgtcaatacgttcctcatc
ttttgccggcagtggcgcaagaagctcatggcgcagaacccggccgcgagtgcgaaagaa
gcctcgaagctcctcggcgacatgtggcaaaagctcaccgaggcgcagcgcgcgagttac
cagccgctcgcagacaaggagaacgcccagcgcatgctcgagtggaagcgcaaggaaggc
gacaagctaccggcaggcgactttagcgccgcggtctcgcaagcgggtacggtgacgccg
catgtgccggcggcgttcgcggggacgcccgtctcgagcgcgggcacggcagcggcgtcg
gcgtcaccaagcggcgatgcgctggacgaactcgaaggcgagaacgacctcgacgacgac
gacgagaacgacgaagacgacgaagacgtggacgacgaagacgacgacgatgacgaatag
DBGET
integrated database retrieval system