KEGG   Saprolegnia parasitica: SPRG_03012
Entry
SPRG_03012        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K13174  THO complex subunit 5
Organism
spar  Saprolegnia parasitica
Pathway
spar03013  Nucleocytoplasmic transport
spar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPRG_03012
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPRG_03012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_03012
   03041 Spliceosome [BR:spar03041]
    SPRG_03012
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     SPRG_03012
Spliceosome [BR:spar03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    SPRG_03012
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 24125545
NCBI-ProteinID: XP_012196983
UniProt: A0A067D0F8
LinkDB
Position
Unknown
AA seq 590 aa
MDRQSPSTSVGQLKAASQELRSLLPKLIDAHDSDISPRVARALLLLQKIKSSTRDTFLET
EAWRKRVADQKDLVEAHHLKLQNLMYEKDHLLREIKRCRGFPMKEMDKIEFPEGQLPVTG
DPDMHAEHLLRLETEKEAREEVQEQQRQLHAKIAAVDEAIVEKRTFLESLPAEIAAIEKA
SEPLQALLSIPVTTMDVARQHDAKELPSALYTLYCELEAYMQAMGPGSLQLRIAPAQATP
SSSTKVSSRSVRERTTPVPEVDERASKRQKTTPLASRSPSPSVASPAPAPAAATSTPAVQ
LAEAYSVAPKAVEIEFMPPAGSSAVPLCVRFIYLPVLGIVTVETPAYPHLLHNLFDKDAG
DVQPNVAAAYALVSEDGHEVDMDYPADAPARPYLWAQWICGLAFQRRSEPTRPEPSIRCV
LTTLAERYESRVALLALSDRLAARRVEAHASLAAVLPKARKTTLVKWTANVRPTEAFATL
HAENSYFRAVLEHDRSRVNVYVEVSPAYPQVPPVVVCEGERRANVPSADQLKDMALEVSL
ASKSWHAPDAKPWLLMHQIMTLMTCLDEVHAKGDKYTFGSKRAVVSDDTA
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggaccgccagagcccgtcgacgtccgtgggccagctcaaggcagcgagccaggagctc
cgcagcctcctgcccaagctcatcgacgcccatgacagcgacattagccctcgcgtggcc
cgagcgctcctcctgctacagaagatcaagagctcgacgcgcgataccttcctcgagacc
gaggcgtggcgcaagcgagtggctgaccagaaggatctcgtcgaagcgcaccacctcaag
ctccagaacctcatgtacgagaaggaccacttgctgcgcgaaatcaagcgctgccgcggc
ttcccgatgaaggagatggacaagatcgagttcccggaaggccagctgcccgtgacgggc
gaccccgacatgcatgctgagcacctccttcgcttggagacggagaaggaagctcgcgaa
gaagtccaagagcagcagcgccagctgcacgccaagattgcagccgtcgacgaagccatt
gtcgagaagcgcaccttcttggagtcgttgcctgccgagatcgccgcgattgaaaaggcg
agcgagccgcttcaagcattgctctcgattccagtgacaacgatggacgtcgcgcgccag
cacgacgccaaggagcttccgtcggcgctctacacgctctactgcgagctcgaggcctac
atgcaggccatgggtccggggtcgttgcagctgcgcatcgcaccggcgcaagcgacaccg
tcgtcctcgaccaaggtcagctcgcgcagtgtccgtgaacgcacgacgccggtgcccgag
gtcgacgaacgcgcgtccaagcgccaaaagacgacgccgctcgcgtctcggtcgccgtcg
ccgtccgtggcgtcgcctgcacccgcgccggcagcggcgacgagcacgcccgccgtgcag
ctggccgaagcctacagcgtcgcgcccaaggccgtcgagattgagtttatgccaccggcg
gggtcgtcggcggtgcccttgtgcgtccgatttatctatcttcccgtgctcggtattgtc
actgtcgagacgccggcgtacccacatctgctgcacaacttgtttgataaagacgcgggc
gacgtgcagcccaacgtcgctgctgcgtacgccctcgtgagcgaagacggccacgaagtc
gacatggactatcccgccgatgcgcccgcgcggccctatctctgggcgcaatggatctgc
ggactcgccttccagcgccggtccgagcccacgcgtcccgagccctcgatccgctgcgtc
ctgaccacgcttgcggagcgctacgagagtcgtgttgcgctgctggcgctctcggaccga
ctcgcggcgcggcgtgtcgaagcgcatgcgtcactcgcagcggttttgcccaaggcgcgc
aagacgacgctggtcaagtggacggccaacgtgcggccgaccgaagcctttgcgacgttg
cacgcggagaacagctacttccgcgccgtcctcgaacacgaccgcagccgcgtcaatgtg
tatgtcgaggtgtcgccggcgtacccgcaagtgccacccgtggtcgtctgcgaaggcgag
cgacgagctaacgtgccgagtgccgaccagctcaaggacatggccctcgaggtgagtctc
gcgagcaagtcgtggcacgcaccggacgccaaaccgtggctgctcatgcaccagatcatg
acgctcatgacgtgtctggacgaggtgcacgccaagggcgacaagtacacgtttggctcc
aagcgcgccgtggtgtccgacgacactgcgtaa

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