Saprolegnia parasitica: SPRG_03012
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Entry
SPRG_03012 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_03012
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_03012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_03012
03041 Spliceosome [BR:
spar03041
]
SPRG_03012
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
SPRG_03012
Spliceosome [BR:
spar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SPRG_03012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
24125545
NCBI-ProteinID:
XP_012196983
UniProt:
A0A067D0F8
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MDRQSPSTSVGQLKAASQELRSLLPKLIDAHDSDISPRVARALLLLQKIKSSTRDTFLET
EAWRKRVADQKDLVEAHHLKLQNLMYEKDHLLREIKRCRGFPMKEMDKIEFPEGQLPVTG
DPDMHAEHLLRLETEKEAREEVQEQQRQLHAKIAAVDEAIVEKRTFLESLPAEIAAIEKA
SEPLQALLSIPVTTMDVARQHDAKELPSALYTLYCELEAYMQAMGPGSLQLRIAPAQATP
SSSTKVSSRSVRERTTPVPEVDERASKRQKTTPLASRSPSPSVASPAPAPAAATSTPAVQ
LAEAYSVAPKAVEIEFMPPAGSSAVPLCVRFIYLPVLGIVTVETPAYPHLLHNLFDKDAG
DVQPNVAAAYALVSEDGHEVDMDYPADAPARPYLWAQWICGLAFQRRSEPTRPEPSIRCV
LTTLAERYESRVALLALSDRLAARRVEAHASLAAVLPKARKTTLVKWTANVRPTEAFATL
HAENSYFRAVLEHDRSRVNVYVEVSPAYPQVPPVVVCEGERRANVPSADQLKDMALEVSL
ASKSWHAPDAKPWLLMHQIMTLMTCLDEVHAKGDKYTFGSKRAVVSDDTA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccagagcccgtcgacgtccgtgggccagctcaaggcagcgagccaggagctc
cgcagcctcctgcccaagctcatcgacgcccatgacagcgacattagccctcgcgtggcc
cgagcgctcctcctgctacagaagatcaagagctcgacgcgcgataccttcctcgagacc
gaggcgtggcgcaagcgagtggctgaccagaaggatctcgtcgaagcgcaccacctcaag
ctccagaacctcatgtacgagaaggaccacttgctgcgcgaaatcaagcgctgccgcggc
ttcccgatgaaggagatggacaagatcgagttcccggaaggccagctgcccgtgacgggc
gaccccgacatgcatgctgagcacctccttcgcttggagacggagaaggaagctcgcgaa
gaagtccaagagcagcagcgccagctgcacgccaagattgcagccgtcgacgaagccatt
gtcgagaagcgcaccttcttggagtcgttgcctgccgagatcgccgcgattgaaaaggcg
agcgagccgcttcaagcattgctctcgattccagtgacaacgatggacgtcgcgcgccag
cacgacgccaaggagcttccgtcggcgctctacacgctctactgcgagctcgaggcctac
atgcaggccatgggtccggggtcgttgcagctgcgcatcgcaccggcgcaagcgacaccg
tcgtcctcgaccaaggtcagctcgcgcagtgtccgtgaacgcacgacgccggtgcccgag
gtcgacgaacgcgcgtccaagcgccaaaagacgacgccgctcgcgtctcggtcgccgtcg
ccgtccgtggcgtcgcctgcacccgcgccggcagcggcgacgagcacgcccgccgtgcag
ctggccgaagcctacagcgtcgcgcccaaggccgtcgagattgagtttatgccaccggcg
gggtcgtcggcggtgcccttgtgcgtccgatttatctatcttcccgtgctcggtattgtc
actgtcgagacgccggcgtacccacatctgctgcacaacttgtttgataaagacgcgggc
gacgtgcagcccaacgtcgctgctgcgtacgccctcgtgagcgaagacggccacgaagtc
gacatggactatcccgccgatgcgcccgcgcggccctatctctgggcgcaatggatctgc
ggactcgccttccagcgccggtccgagcccacgcgtcccgagccctcgatccgctgcgtc
ctgaccacgcttgcggagcgctacgagagtcgtgttgcgctgctggcgctctcggaccga
ctcgcggcgcggcgtgtcgaagcgcatgcgtcactcgcagcggttttgcccaaggcgcgc
aagacgacgctggtcaagtggacggccaacgtgcggccgaccgaagcctttgcgacgttg
cacgcggagaacagctacttccgcgccgtcctcgaacacgaccgcagccgcgtcaatgtg
tatgtcgaggtgtcgccggcgtacccgcaagtgccacccgtggtcgtctgcgaaggcgag
cgacgagctaacgtgccgagtgccgaccagctcaaggacatggccctcgaggtgagtctc
gcgagcaagtcgtggcacgcaccggacgccaaaccgtggctgctcatgcaccagatcatg
acgctcatgacgtgtctggacgaggtgcacgccaagggcgacaagtacacgtttggctcc
aagcgcgccgtggtgtccgacgacactgcgtaa
DBGET
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