KEGG   Saprolegnia parasitica: SPRG_03275
Entry
SPRG_03275        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
spar  Saprolegnia parasitica
Pathway
spar03020  RNA polymerase
spar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPRG_03275
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPRG_03275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spar03021]
    SPRG_03275
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_03275
Transcription machinery [BR:spar03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     SPRG_03275
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SPRG_03275
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 24125791
NCBI-ProteinID: XP_012197245
UniProt: A0A067CZ22
LinkDB
Position
Unknown
AA seq 159 aa
MNALGRNHAIDTEDAAELILGEDFQGETCLSNAEVAVILEKQKSDYESQEKTLTNVFQKT
YSYVQRFSGTKDPVSNQASVTELREALITYEFSREHPDDPSQTVEIRLEEFEIACLSNLN
PEEPEEAMALIPSLQKRFTEDDIEEILSIIARTTARMHA
NT seq 480 nt   +upstreamnt  +downstreamnt
atgaacgcattggggcgcaaccacgcgatcgacacggaggacgcggccgagctcatcctt
ggcgaagacttccagggcgagacgtgcttgtccaacgccgaggtcgccgtcatcctcgag
aagcaaaagtccgactacgagagccaagagaagacgctcaccaacgtcttccagaagacg
tactcgtacgtgcagcgcttctcgggcacgaaggacccggtctcgaaccaagcgtccgtg
accgagctccgcgaggcgctcatcacgtacgagttctcgcgcgagcacccggacgacccg
tcgcagacggtcgagatccgcctcgaagagtttgagattgcttgtctctccaacctcaac
ccggaagagcccgaagaggccatggcgctcatcccgtcgctccagaagcgcttcaccgaa
gacgacattgaagagatcctctcgatcattgcgcggacgaccgctcgcatgcatgcctaa

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