KEGG   Saprolegnia parasitica: SPRG_03552
Entry
SPRG_03552        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
spar  Saprolegnia parasitica
Pathway
spar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPRG_03552
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spar03041]
    SPRG_03552
Spliceosome [BR:spar03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    SPRG_03552
 Complex C
   U5 SnRNP specific factors
    SPRG_03552
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_RIG_2nd WD40_RFWD3 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_DCAF12 Ge1_WD40 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 24126046
NCBI-ProteinID: XP_012197522
UniProt: A0A067CXW6
LinkDB
Position
Unknown
AA seq 369 aa
MGGDKRSAPDAETTALAKRARPDENQTFPRSSAIVPVDAKVVTISAKADSSQRTSDLLAP
TMLLSGHSAAVYSMAFSPNGKSVASASFDKSIFLWNVYGECANYNVLSGHKNAVLQVQWS
YDGSMLMSASADKTVGLWDAETGRRLKNYKTHTAIVNSVCPVAKGPQLLVSGSDDRTIKI
WDTRLKREVDTIEERFQVTAVCFGADSSQVFSGGVDGLVKQWDMRKADAGPVDILTGHSE
IITSLQMSPDSNFVLSNAMDSTLRKWDVRPFCEGARCKMIYYGAKHSNDRNLIRANWSPD
MRYVGSGSADRHVYIWDAETGELRYHLPGHSGSVNEVAFHPNPSEPIVGSCSSDKTMYFG
ELLDSYVAA
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgggcggtgacaagcgatcggcgccggacgccgagacgacggccttggccaagcgcgcg
cgcccggatgaaaaccagaccttcccgcgcagctcagccatcgtgcccgtggacgccaag
gtcgtgaccatcagcgccaaggccgacagcagccagcggacgtccgacctcctcgcgccc
acgatgctcctctcgggccacagcgctgccgtctactcgatggcttttagcccgaacggc
aagagcgtggcctcggcctcgttcgacaagtcgatcttcctctggaacgtctacggcgaa
tgcgccaactacaacgtcttgagcggccacaagaacgcggtgctccaggtgcaatggtcg
tacgacggcagcatgctcatgtcggcctcggcggacaagaccgttggcctctgggacgcc
gagacgggccgccgcctcaagaactacaagacacacacggccattgtcaacagtgtctgc
cccgtcgccaagggtccgcagctccttgtcagtggcagcgacgaccgtacgatcaagatt
tgggatacgcggctcaagcgcgaagttgacacgatcgaagagcgtttccaggtcacggcc
gtctgcttcggcgccgactcgagccaagtcttctcgggcggtgtcgacggactcgtcaag
cagtgggacatgcgcaaggccgacgccgggcccgtcgacattctcacaggccacagcgag
atcattacgagcttgcagatgagtccggacagcaactttgtcctctcgaacgcgatggac
agcacgctgcgcaagtgggacgtgcgtccgttctgcgaaggtgcgcgctgcaagatgatc
tactacggcgccaagcacagcaacgaccgcaacttgattcgcgcgaattggagccctgac
atgcgctacgtgggcagcggtagcgccgatcgccacgtgtacatttgggacgcggagacg
ggcgagctgcggtaccacctcccggggcactctggcagcgtcaacgaggtcgcgttccac
ccgaacccgagcgagccaatcgtcggctcgtgcagtagcgacaagaccatgtactttggc
gagctcctcgacagctacgtcgcggcctag

DBGET integrated database retrieval system