KEGG   Saprolegnia parasitica: SPRG_04038
Entry
SPRG_04038        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K10610  DNA damage-binding protein 1
Organism
spar  Saprolegnia parasitica
Pathway
spar03420  Nucleotide excision repair
spar04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    SPRG_04038
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPRG_04038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spar04121]
    SPRG_04038
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_04038
Ubiquitin system [BR:spar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     SPRG_04038
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      SPRG_04038
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      SPRG_04038
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 24126511
NCBI-ProteinID: XP_012198018
UniProt: A0A067CLM3
LinkDB
Position
Unknown
AA seq 946 aa
MDDRKSYVVTAHKPTSVSHSVVGRFTGASDVNLVLAKTTRVEIHLLTPEGLTPVHDVAIY
GRITMLEVFRPPSSPVDLLFVCTQRHQFCVLAYDPATKSIVTRAQGNIRDPIGRMSDVVT
SGNIDPEGRLIGMNLYEGYFKVIPMDASGKLSDAFNIRMDELRVIDVKFLFGCAKPTIAV
LYEDQKGRHVKTYVVLAKERELAEGPWSQSHVESSANLLIPVPAPAGGVLIVSQQMIVYH
NGSTCHAISMQSTIIQVYGQVDRDGSRFLLADQFGLLQVVALQRNKDTVTGIALEVLGET
SIASTLSYLDNGVVFVGSATGDSQLVKLLPARDAATGSYLEVLDAYVNIGPIVDFVVMDL
DRQGQGQVVTCSGAYKDGSLRVIRNGIGINEQAATELPGIKGMWALRTSFAADQDAYLVQ
SFVSETRVLGFSADGDDGDVELAEHEIKGLNPAKTLLCRNVLGDAWLQVTEFDVRLIACA
TSDVVATWKAPGRITVAAANPCQAVVAIAGGVLVYFEIDGAQLHLVAETRLPHEIACLDI
SPPTSDTKGTLDGRHWETRLPKASRVAVGLWSELSVSLLALPTLALETKQLLGGDVLPRS
VLSIAFDGVPHLLVGMGDGTLLVYTLAADGHLAPLKRISLGTQPILVSAFRSKDVLHVFA
ASDRPTVIYTNNGKLLFSNVNAKEVSVMCAFDSPALPDCLALASPDELTLGTIDDIQKLH
VQSVPLHEWPRRLAHDPMSHTLGVTTIKYTLDETHMEEVEVGYVRLMDDQSFDMLHAYKL
DPFEIGCAIVSASFDDARYYCVGTAYVHEEELEPHQGRILVFQVVAGKLVLVAEKEVKGA
VYCLNAFQNKLLAGINSKTQVYKWSDTDDLEKELVAECGHHGHTLVLFLESRGDFIAVGD
LMKSISLLNYKALDGSVEEVAKDLNSNWMTAIDMPETAMCSGPRPT
NT seq 2841 nt   +upstreamnt  +downstreamnt
atggacgaccggaagagctacgtggtcactgcgcacaagccgacgagcgtctcgcactcg
gtcgtcgggcgcttcacgggcgccagcgacgtcaacctcgtcctcgccaagaccacgcgc
gtcgagatccatctgctcacgcccgaagggctcacgcccgtccacgacgtggcgatctat
ggccgcatcacgatgctcgaggtgttccgcccgccctcgtcgcccgtggaccttctcttt
gtgtgcacgcagcggcaccagttttgcgtcttggcgtacgatccggcgaccaagagcatt
gtcacgcgggcccaaggcaacattcgcgacccgattggccgcatgagcgacgtcgtcacg
agcggcaacattgacccggaaggccgcctcattggcatgaacctctacgaaggctacttc
aaagtcatccccatggacgcgagtggcaagctctcggacgcgttcaacattcgcatggac
gagctccgcgtcattgacgtcaagtttctctttggctgcgccaagcccacgatcgcggtt
ctgtacgaagaccagaaggggcgacacgtcaagacgtacgtcgtcttggcaaaggagcgg
gagctggccgaagggccatggagccagtcgcacgtcgagtcgagcgccaacttgctcatt
cccgtgccggcgcccgccggcggcgtcctcatcgtgagccagcagatgatcgtgtaccac
aacggcagcacgtgccacgcgatctcgatgcagagcacgatcatccaggtgtacgggcag
gttgaccgcgacggctcgcgcttcctcttggccgaccagtttggtcttctccaggtcgtc
gcgctccagcgcaacaaggacacggtcaccggcattgcgctcgaagtgctcggcgagacc
agcatcgcgtcgacgctctcgtacctggacaacggcgtcgtctttgtcggcagcgcgacc
ggcgactcgcagctcgtcaagctcctgcccgcgcgcgacgccgcgactggctcgtacctc
gaggtgctcgatgcctacgtcaacattggtccgatcgtcgacttcgttgtgatggacctc
gaccgccaaggccaaggccaggtggtcacctgcagcggcgcgtacaaggacgggtctctc
cgcgtcatccgcaacggcattggcatcaacgagcaggcggcgaccgagctccccggcatc
aagggcatgtgggcgctgcgcacgtcgtttgccgccgaccaagatgcgtaccttgtccag
agctttgtgagcgagacgcgcgtgcttggtttctcggcggacggcgacgacggcgacgtc
gagctcgccgagcacgagatcaagggcttgaacccggccaagacgctcctgtgccgcaac
gtgcttggcgatgcgtggctccaagtcaccgaatttgacgtgcgcctcattgcgtgtgcg
accagcgacgttgttgcgacgtggaaggcgccgggccgcatcacggtcgccgccgcgaac
ccgtgccaagctgtcgttgcgatcgccggcggcgtcctcgtctactttgaaatcgacggc
gcgcagctgcaccttgtggcggagacgcgcctgccccacgagattgcgtgcctcgacatt
tcgccgccgacgagcgataccaagggcaccctcgacggccgccactgggagacgcggctc
ccgaaagcgtcgcgtgtcgcggtcggtctctggtcggagctctcggtgtcgctgctggcg
ctgccgacgctggcgctcgagaccaagcagctgctcggcggcgacgtgctgccgcgctcg
gtgctctcgatcgcgtttgacggcgtgccgcatctgctggtgggcatgggcgacggcacg
ctgctcgtgtacacgcttgcggccgacgggcacctcgcgccgctcaagcgcatcagcctc
gggacgcagccgatcctcgtgtcggcgttccggtccaaggacgtgctacatgtgtttgcg
gcctcggaccgcccgaccgtcatctacaccaacaacggcaagctcctcttctccaacgtc
aacgccaaggaagtgagcgtcatgtgcgcgttcgactcgccggcgctgcccgactgcctc
gcgctcgcgtcgccggacgagctcacgctcgggacgatcgacgacatccagaagctccat
gtgcagagcgtgccgctgcacgagtggccgcgccggctcgcgcacgacccgatgtcgcac
acgctcggcgtcacgacgatcaagtacacgctggacgagacgcacatggaggaagtcgag
gtcggctacgtgcgccttatggatgaccagtcgtttgatatgctccatgcgtacaagctg
gacccgttcgagattgggtgcgcgatcgtgtcggcgtcgtttgatgacgcgcgctactac
tgcgtcgggacagcgtacgtgcacgaagaagagctcgagccgcaccaaggccgcatcctc
gtcttccaggtcgtcgccggcaagctcgtgctcgtggccgagaaagaggtcaagggcgcg
gtctactgcttgaacgcgttccagaacaagctgctcgccggcatcaacagcaagacgcaa
gtgtacaagtggagcgacacggacgacctcgagaaggagctcgtcgccgagtgcggccac
cacggccacacgctcgtgctcttcctcgagtcgcgcggcgactttatcgcggtcggcgat
ctcatgaagtcgatctcgctgctcaactacaaggcgctcgacggcagcgtcgaagaagtc
gcgaaggacctcaattcgaactggatgacggcgattgatatgcctgagactgccatgtgc
tcggggccgaggccgacttga

DBGET integrated database retrieval system