Saprolegnia parasitica: SPRG_04173
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Entry
SPRG_04173 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spar03016
]
SPRG_04173
Enzymes [BR:
spar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SPRG_04173
Transfer RNA biogenesis [BR:
spar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPRG_04173
Prokaryotic type
SPRG_04173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
3HCDH_RFF
Motif
Other DBs
NCBI-GeneID:
24126639
NCBI-ProteinID:
XP_012198169
UniProt:
A0A067CP05
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MQCGRPDDFQVREVDEAGHVVDLDPAQSPALPMNAIPETAKKTSRAIEVTVPDCGWEAFL
LQRLGDSACANVAAVAAGTIGSYALPSPDNLEDKVALSKAIQFVYPALQCDTVRASTNDA
GDTTPASIALSLDPLYVKLEKGGLAVDDCKRIVTFLVHGPLAPSAEAGVRLQQELTKEAR
TKVHRLFASATACLVTKTNAAQGIDVYFSPKMLQRRKRKQQFYVQFVLQKVNVDHFSALE
ALARAAKTPTSSFTYAGTKDKRAVTTQRLVAQSVAPSVLLDAHAALAPMGLAVGHLAYVA
APLTLGQSGGNQFTIRLRNVEESPEVVAAAFASVASTGFINYFGLQRVGSPLQSVRTHHV
GQALFQQDYAHAFSLLLTASEHDTPGLAAAKTTFTASRDVNAALRALPPSAVTERAVLMG
LKRHGSDAYEKAVLNLPHHRRVMYLHAFQSLLFNLVASHRVATYGANVVAGDLVLDPATK
NVRVVASADDATCCDLNNVVLPLFGSHTTVPTHAVGDYYKQVLDEHGISEDQAKQLKGAY
RRVFCVPKDLHWTQDTEDATVTVSFQLPPGSFATMLLREVLKNMDFDATVGGTDDATD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcggtaggcccgacgactttcaagtgcgcgaggtcgacgaggcaggccatgtt
gtggacctcgacccagcgcagtcgcccgccttgcccatgaacgccatacccgagacggcc
aagaagacgagccgtgcgatcgaggtgacggtgccagactgcggctgggaagcattcctc
ctccagcgccttggcgacagcgcatgcgctaacgtggccgcggtggccgccggcaccatc
ggcagctacgcgctaccgagcccggataacctagaggacaaggtcgccctctccaaggcc
atccagtttgtgtaccccgcgctgcagtgcgacacggtgcgtgcgtcgacaaatgatgcc
ggcgacacgacacccgcctcgattgcgctctcgctcgacccgctctatgtcaagctcgaa
aaaggtggcttggcggtcgacgactgcaagcgaatcgtgacgttcctcgtccacggcccg
ctggcgccgtctgccgaagctggtgttcggctgcagcaagagctgacgaaggaggcgcga
accaaggtccatcggctttttgcgtctgcgaccgcctgtctcgtgaccaagaccaacgcg
gcgcagggcatcgacgtgtacttttcgccgaaaatgctgcagcggcgcaagcgcaagcag
cagttttatgtgcaattcgtactgcaaaaggtcaacgtcgaccactttagcgcactcgag
gcgctcgcccgcgcggccaagacaccgacgtccagcttcacgtacgcaggcaccaaggac
aagcgcgccgtcacgacccagcgccttgtcgcgcagagcgtcgcaccaagtgtgctcctc
gatgcccacgcagcgctggcgccaatggggctcgccgtcgggcaccttgcgtacgttgcc
gcccccctgacactcgggcaatctggcggcaaccagtttaccattcgactgcgcaacgtc
gaagagtccccggaggttgtcgccgcggcctttgcgagcgtcgcttcgactggctttatc
aactactttgggcttcagcgcgtgggctcgccgctccaaagtgtgcgcacccaccacgtc
ggccaagcgctgttccagcaagactacgctcacgccttttcgcttttgttgacggcatcc
gagcacgacacaccgggtctcgcggccgccaagacgacatttacagcgtcgcgtgatgtg
aatgcagcgctgcgtgcgctgccaccttcggccgtcaccgagcgcgctgtcctcatgggt
ctcaagcgccatgggtcggacgcgtacgagaaggcggtgctcaatttgccgcatcaccgc
cgcgtcatgtacttgcatgcgttccagagcctcctctttaacctcgtcgcgtcccaccgc
gtcgcaacgtacggcgccaatgtcgtcgctggcgacctcgtgctcgatccggcgaccaag
aatgtgcgcgtcgttgcatcggccgacgatgctacctgctgcgatctgaacaatgtggtg
ctgccgctctttggcagccacacaacggtgccaacgcacgccgtgggcgactactacaag
caggtgcttgacgagcacgggatttcggaggaccaagcgaagcagctcaagggggcgtac
cggcgcgtcttttgcgtgccaaaggacctgcattggactcaagacacggaggacgccacg
gtgaccgtctcattccagcttccccccgggtcgtttgcaacgatgctgctgcgtgaagtg
ctcaagaacatggactttgatgcgaccgtcggcggtaccgacgatgccaccgactaa
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