Saprolegnia parasitica: SPRG_04478
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Entry
SPRG_04478 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
spar
Saprolegnia parasitica
Pathway
spar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPRG_04478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_04478
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPRG_04478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
24126921
NCBI-ProteinID:
XP_012198792
UniProt:
A0A067CUW7
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MSTYALSGRERETARLERSIAELRRVAAQTHEQDKTTDLLSRLRQAPSGDSTYIQEDATS
RWNAQVQPTSDISPWPPALRPLASSPGTKFGLFKALKHAWLIAGPTVYLWDYASSKATIV
TCPAMPDPVLACGITQPLSGTLFSDVVQHLLVVVTEKEVRVLALVADKTTGSFKVQDTLM
QAPLPSTTLLSSIVCTPSRRILLGGVDGALYEYPPTTEKARSVRLATSHWNQYLPPLVRD
LLAPARSAITQLLYDDARHVIYALHSSGHVSVYDARTKNIACVTYTIIDASIVSLSLVND
GDASSVHAVAITSSGIRLFLSTSHAPNGPPETCRVVFSRPPPPCVTSVDRAVYASGVTFF
GYKSTLVSAAADVGLATSYRELVRSHALLGGHMVVEETSVLLAAPAGLPSLKRSASGASL
PSSLDFLRASRHELSTQFTSTAPRTFVSLSEGGVQCWQKQRPLDHLRHILTHAPTPLHRA
SPMVASYGPHAIAVHSDHYNGLVRVLVRFLSGIWHAALATSTSKGSASATFRPALSKDEI
ARPRDVLCRLKQLLEHVAVPYAVAVHATSSENSSSSMIATEQRALQDIHALVGRCIGACE
GLLLVYAHQTVFSHMANVAFYDVVCNENGARALQAMLRDVAKESPSVVPTALARCGAFFT
LEDAGAFQGTDALARAKAAATPSARDAALHESLAKLVAAAPTWPPTTETIEHLARIGKDY
ELCSFWKGLVNLAVAVAARWPLHSADQKACYNGVLDALAHVAEHNDVASAQTIVGLVVAT
TDVHLQQVVLQWVVSKGHKTWLLHCPLTPTVRTVLAADVDWLAALCLEHHEFEEAATVLW
KAAHDLSVTRSIGDRTAWVARALSSIQHTTNAQHAKDIQDTLDVFQTQTRLATAFRQHNL
GSEAVRHALEFEILDMSTLYHEYAMPYERYEDCLRIMHACRFYEPETIVMLWKKALYSLL
PQVADRNAAAPIATWLDEAYAAAGLGAIVSMSSAFEACEWTRSVSHLVVSLGRALHPSPV
FPVEWLITEVETIASHARSLGHHTSSPFTPVHLFVDLGMPASEVLAWYLHLFGSSTGAAL
KIQLLWSLLALRPSVPTLPSTYEDMMAHARNWLATHAPGTIPSVL
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctacgccctgagcggacgcgaacgagagacggcgcgcctcgagcgctcgatc
gccgagctgcgccgcgtggctgctcagacgcacgagcaggacaagacgacggacctcctc
tcgcgcctccgccaagccccgtccggcgacagcacatatatccaggaagacgcgacatcg
cgatggaacgcgcaggtccagccgacatccgacattagcccatggccgccggcgctgcgg
ccgctggcgtcgtcacccggcaccaagtttggcctcttcaaggccctcaagcacgcatgg
ctcatcgctggcccgaccgtctacctctgggactatgcgtcgtccaaggccacgatcgtc
acgtgccctgcgatgcccgatcccgtgctcgcgtgcggcatcacgcagccgctgagcggt
acgctctttagcgacgtcgtccagcaccttttggtcgtcgtcaccgagaaggaagtccgc
gtcctcgcgttggtcgccgacaagaccaccggtagcttcaaggtacaagatacgctcatg
caggcgccgcttccgtcgacgacgcttctatcgtcgatcgtctgcacgccgtctcgacgc
atcttgctcggcggcgtcgacggcgcgctgtacgaatatccgccgacgaccgagaaggcg
cgctcggtgcgcctcgcgacgtcgcactggaaccagtaccttccgccgctcgtgcgcgat
ctgctcgcccccgcccggtcggcgatcacgcagctgctctacgacgacgcgcgccacgtc
atctacgcgctgcactcgtccgggcacgtctccgtctatgacgcacggaccaagaacatt
gcgtgcgtcacgtacacgatcatcgacgcgtccattgtgtcgctgagtctggtcaatgac
ggcgacgcgtcgtcggtccatgcggtcgccatcacgtcctcgggtatccggctcttcctc
tcgacgtcgcatgcaccgaatggaccgccggagacatgccgggttgtcttttcgcggccg
ccgccgccatgcgtcacgtccgtggaccgtgcggtctatgcatcgggcgtcaccttcttt
ggctacaagtcgacgctcgtgtcggcggccgccgacgtgggcctcgcgacctcgtaccgc
gagctcgtccggtcgcacgcgctccttggcgggcacatggtcgtcgaagaaacgtcggtt
ctactcgcggcgccggccggccttccgtcgctcaagcgcagcgcgtccggcgcgtcactg
ccgtcgtcgctggactttttacgcgcgagtcggcacgaactctcgacgcagtttacgtcg
acggcgccgcgcacgtttgtgtcgctctcggagggcggcgtgcagtgctggcagaagcag
cggccgctcgaccacctccggcatatcctcacgcacgcgcccactccgctccatcgggcg
tcgcccatggtcgcgtcgtacgggccgcatgcgatcgctgtgcactcggaccactacaac
ggcctcgtgcgcgtcctcgtccgctttctcagcggcatctggcatgccgcgctcgccacg
tcgacaagcaagggatctgcctcggcgacgttccgtccggccttgtcgaaagacgagatt
gcgcggccacgcgatgtgctctgtcgtctcaaacaactcttggagcacgtggccgtgccg
tatgccgtcgcagtgcatgccacgtcatcggaaaacagcagcagcagcatgattgcgacc
gagcagcgggctctgcaagacatccacgcacttgtcgggcgctgcattggcgcgtgcgaa
ggcttgctcttggtctacgcgcaccagactgtgttcagccatatggccaatgtggccttc
tacgacgtcgtgtgcaatgaaaatggcgcgagagcgctccaagcgatgctgcgcgacgtg
gcgaaagagtcgccgtcggtcgtgccgacagcccttgcgcgctgcggagcgttcttcacc
ttggaggacgccggtgctttccagggcacggacgcgctggcgcgggccaaggccgcggca
acgccgtctgcgcgggacgctgcgctgcacgaatcgctcgcgaagcttgtggcggcggcg
cccacgtggccgcccaccaccgagaccatcgagcacctcgctcgcatcggcaaggactat
gagctctgctcgttctggaagggcctcgtcaatctcgcagtggcggtcgccgcgcgctgg
ccgctgcactcggccgaccagaaagcgtgctacaacggcgtcctggatgccctcgcgcac
gtggctgagcacaatgacgtggcgtcggcacagacgattgtcggcctcgtggtcgcgacg
accgacgtgcacttgcaacaagtggtgctgcaatgggtcgtctcgaaagggcacaagacg
tggctcctccactgcccattgacgccgacggtgcgaacggtcttggcggctgacgtcgac
tggctcgcagcgctgtgcttggagcaccacgaattcgaagaggccgcgacggttctctgg
aaggcggcgcatgaccttagcgtcacgcgtagcattggcgatcgcacggcgtgggtcgcg
cgcgccctcagcagcatccagcacacgaccaacgcacagcacgccaaggacattcaggac
accctcgatgtctttcaaacgcagacgcggctggcgacggcattccgccagcacaacctc
gggtcggaggctgtgcgacacgcgctcgagtttgagattctcgacatgtcgaccttgtac
cacgagtatgcgatgccgtacgagcgctacgaagactgcctccgcatcatgcacgcgtgc
cgcttctacgaacctgaaacgatcgtgatgctgtggaagaaggccttgtactcgcttttg
ccgcaggtggccgaccgcaacgccgcggcgcccattgcaacgtggctggacgaggcgtat
gccgccgcgggcctcggtgcgatcgtgtccatgtcgagtgcgtttgaagcttgcgagtgg
acgcggagcgtgagtcacctcgttgtctcgctgggtcgcgcgctgcacccgtcgccggtc
tttcccgtcgagtggctcatcaccgaagtcgagacgattgcatcgcacgcgcggtcgctc
gggcaccacacgtcgtctccatttacgcccgtgcatttgtttgtggacctcggcatgccg
gcctcggaagtgctggcgtggtacttgcacctctttggcagcagcaccggcgccgcactg
aagatccaactgctctggagccttctggcgctgcgccctagtgtaccgacgctgccgtcg
acgtacgaggacatgatggcgcatgcccgcaactggctcgccacgcacgcacccggtacg
atcccatccgtcctgtga
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