KEGG   Saprolegnia parasitica: SPRG_04586
Entry
SPRG_04586        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
spar  Saprolegnia parasitica
Pathway
spar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPRG_04586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spar03041]
    SPRG_04586
Spliceosome [BR:spar03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    SPRG_04586
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st PRP4 Beta-prop_SCAP NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_RIG_2nd Ge1_WD40 WD_LRWD1 Beta-prop_Vps41 Beta-prop_RIG_1st eIF2A Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 Beta-prop_DCAF12 RMC1_N Beta-prop_Nup120_160 Beta-prop_IFT140_2nd Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 24127024
NCBI-ProteinID: XP_012198389
UniProt: A0A067CNA6
LinkDB
Position
Unknown
AA seq 507 aa
MAERSTIHFGALSASSIVGAGSSSVQAGIRAGNINTGNSGEKEVLELSETSRLAQEKHAE
QLRRLETERRARLIQVPTRTEEVIQQLRSLGEPITLFGEKPEDRRARLRDLLGALQLAGD
VDTIVAAQAKANAAASQQVGYEKEKKVAIEDQLFYVPLKTNDLKVARHAMFKHSMVSTSA
RLQQERAQMEGTVFDADKHAAQLYREAQETSLNASQLADVRPLSHVKYSPDASLLATGSW
SSNVKIWDSKSCDLVHTLTGHTDRITGLAWHPASTTESPILASGAADGTAKIWKGNALAM
TLKGHQNRLGQIAFHPLGSYLATTSFDHSWRLWDIERGTELLFQEGHYREVYAIAAQPDG
ALMATGDLNGLGRIWDIRSGKAILPLQGHAKQIVSMSWHPNGHVLATGSDDHTIRVWDLR
KRQNIYVVPAHDAMVSTVCYSSSGEVLASASFDGSMKLWRSRNWTCLAVLKGHDGKVMSL
DMAPDETHYVSAGWDRTFKTWAPAREC
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggccgagcgatcgacgatccactttggcgcgctctctgcgagcagcatcgtcggcgca
ggctctagctccgttcaggccggtatccgtgcgggtaacatcaacacgggcaactcgggt
gagaaggaggtgcttgagctctcggagacgagtcgactggcccaggagaagcatgcggag
cagcttcggcggctcgagacggagcgccgcgcgcgcttgattcaagtgccgacgcgcacg
gaagaagtgatccagcagctgcgtagcctcggtgagcccatcacattgttcggcgagaag
cccgaagatcgccgggcacgtcttcgcgaccttctgggtgccctccagctcgcgggcgac
gtcgacacgatcgtcgcggcgcaggctaaagcgaacgctgctgcctcccagcaagtcggg
tacgagaaggaaaagaaggttgcgatcgaagaccagcttttctacgtgccgctcaagacg
aatgacctcaaggtcgcccgccacgccatgttcaagcactcgatggtgagcacgagcgcg
cggctccagcaagagcgcgcgcaaatggaaggaacggtctttgatgccgacaagcacgcg
gcacagctgtaccgcgaggcgcaagagacgagcctgaacgcgagtcagctcgcggacgtt
cggccgctctcgcatgtcaagtattcacccgacgcgagtctcttggcgacagggtcgtgg
agctcgaacgtcaagatctgggatagcaagtcgtgcgacctcgtgcacacgttgacgggt
cacacggatcgcatcacgggcctcgcctggcacccggcgtcgacgacggaaagtccgatc
ttggcctcgggcgcggccgatggcacggccaagatctggaaaggcaacgcgctggccatg
acgctcaaggggcaccagaaccggctgggccaaatcgcgtttcatccgctcggctcgtac
ctcgcgacaacgagtttcgaccactcgtggcggctctgggacattgagcggggcacagag
ctcctcttccaggaaggccactaccgcgaagtctatgcgatcgcggcgcagcccgacggc
gcgctcatggcgacaggggacctcaatggcctcggccgcatctgggacattcggtcgggg
aaagcgatcttgccgctccagggccacgccaagcagatcgtgtccatgagctggcacccc
aacggccacgtgctcgcgacgggcagtgacgaccacacgatccgcgtctgggatcttcgc
aagcgccaaaacatctacgtcgtgccggcccacgatgcgatggtgtccactgtgtgctac
tcgtcgtcgggcgaggtgctcgcgtcggcgtcgtttgatgggtccatgaagctgtggcgg
tcgcgcaactggacctgccttgccgtgctgaaaggccatgacggcaaggtcatgtcgctc
gacatggcgccagacgagacgcactacgtctcggcgggctgggaccgcaccttcaagacc
tgggcgccggcccgcgagtgctaa

DBGET integrated database retrieval system