Saprolegnia parasitica: SPRG_04586
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Entry
SPRG_04586 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
spar
Saprolegnia parasitica
Pathway
spar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPRG_04586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spar03041
]
SPRG_04586
Spliceosome [BR:
spar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
SPRG_04586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_SCAP
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
Ge1_WD40
WD_LRWD1
Beta-prop_Vps41
Beta-prop_RIG_1st
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
Beta-prop_DCAF12
RMC1_N
Beta-prop_Nup120_160
Beta-prop_IFT140_2nd
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
24127024
NCBI-ProteinID:
XP_012198389
UniProt:
A0A067CNA6
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MAERSTIHFGALSASSIVGAGSSSVQAGIRAGNINTGNSGEKEVLELSETSRLAQEKHAE
QLRRLETERRARLIQVPTRTEEVIQQLRSLGEPITLFGEKPEDRRARLRDLLGALQLAGD
VDTIVAAQAKANAAASQQVGYEKEKKVAIEDQLFYVPLKTNDLKVARHAMFKHSMVSTSA
RLQQERAQMEGTVFDADKHAAQLYREAQETSLNASQLADVRPLSHVKYSPDASLLATGSW
SSNVKIWDSKSCDLVHTLTGHTDRITGLAWHPASTTESPILASGAADGTAKIWKGNALAM
TLKGHQNRLGQIAFHPLGSYLATTSFDHSWRLWDIERGTELLFQEGHYREVYAIAAQPDG
ALMATGDLNGLGRIWDIRSGKAILPLQGHAKQIVSMSWHPNGHVLATGSDDHTIRVWDLR
KRQNIYVVPAHDAMVSTVCYSSSGEVLASASFDGSMKLWRSRNWTCLAVLKGHDGKVMSL
DMAPDETHYVSAGWDRTFKTWAPAREC
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgatcgacgatccactttggcgcgctctctgcgagcagcatcgtcggcgca
ggctctagctccgttcaggccggtatccgtgcgggtaacatcaacacgggcaactcgggt
gagaaggaggtgcttgagctctcggagacgagtcgactggcccaggagaagcatgcggag
cagcttcggcggctcgagacggagcgccgcgcgcgcttgattcaagtgccgacgcgcacg
gaagaagtgatccagcagctgcgtagcctcggtgagcccatcacattgttcggcgagaag
cccgaagatcgccgggcacgtcttcgcgaccttctgggtgccctccagctcgcgggcgac
gtcgacacgatcgtcgcggcgcaggctaaagcgaacgctgctgcctcccagcaagtcggg
tacgagaaggaaaagaaggttgcgatcgaagaccagcttttctacgtgccgctcaagacg
aatgacctcaaggtcgcccgccacgccatgttcaagcactcgatggtgagcacgagcgcg
cggctccagcaagagcgcgcgcaaatggaaggaacggtctttgatgccgacaagcacgcg
gcacagctgtaccgcgaggcgcaagagacgagcctgaacgcgagtcagctcgcggacgtt
cggccgctctcgcatgtcaagtattcacccgacgcgagtctcttggcgacagggtcgtgg
agctcgaacgtcaagatctgggatagcaagtcgtgcgacctcgtgcacacgttgacgggt
cacacggatcgcatcacgggcctcgcctggcacccggcgtcgacgacggaaagtccgatc
ttggcctcgggcgcggccgatggcacggccaagatctggaaaggcaacgcgctggccatg
acgctcaaggggcaccagaaccggctgggccaaatcgcgtttcatccgctcggctcgtac
ctcgcgacaacgagtttcgaccactcgtggcggctctgggacattgagcggggcacagag
ctcctcttccaggaaggccactaccgcgaagtctatgcgatcgcggcgcagcccgacggc
gcgctcatggcgacaggggacctcaatggcctcggccgcatctgggacattcggtcgggg
aaagcgatcttgccgctccagggccacgccaagcagatcgtgtccatgagctggcacccc
aacggccacgtgctcgcgacgggcagtgacgaccacacgatccgcgtctgggatcttcgc
aagcgccaaaacatctacgtcgtgccggcccacgatgcgatggtgtccactgtgtgctac
tcgtcgtcgggcgaggtgctcgcgtcggcgtcgtttgatgggtccatgaagctgtggcgg
tcgcgcaactggacctgccttgccgtgctgaaaggccatgacggcaaggtcatgtcgctc
gacatggcgccagacgagacgcactacgtctcggcgggctgggaccgcaccttcaagacc
tgggcgccggcccgcgagtgctaa
DBGET
integrated database retrieval system