KEGG   Saprolegnia parasitica: SPRG_04997
Entry
SPRG_04997        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
spar  Saprolegnia parasitica
Pathway
spar03030  DNA replication
spar03410  Base excision repair
spar03420  Nucleotide excision repair
spar03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPRG_04997
   03410 Base excision repair
    SPRG_04997
   03420 Nucleotide excision repair
    SPRG_04997
   03430 Mismatch repair
    SPRG_04997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spar03032]
    SPRG_04997
   03036 Chromosome and associated proteins [BR:spar03036]
    SPRG_04997
   03400 DNA repair and recombination proteins [BR:spar03400]
    SPRG_04997
DNA replication proteins [BR:spar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SPRG_04997
  DNA Replication Termination Factors
   ELG1-RFC complex
    SPRG_04997
Chromosome and associated proteins [BR:spar03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SPRG_04997
DNA repair and recombination proteins [BR:spar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SPRG_04997
  Check point factors
   HRAD17(Rad24)-RFC complex
    SPRG_04997
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_14 ATPase_2 RuvB_N ResIII AAA_7 AAA_16 AAA_24 AAA_5 DEAD AAA_30 AAA_assoc_2 AAA_11 nSTAND3 DUF815 AAA_18 TniB bpMoxR MCM Mg_chelatase AAA_2 FtsK_SpoIIIE Bac_DnaA SLFN-g3_helicase RNA_helicase TIP49 AAA_25
Other DBs
NCBI-GeneID: 24127411
NCBI-ProteinID: XP_012198901
UniProt: A0A067CLZ0
LinkDB
Position
Unknown
AA seq 340 aa
MDAKADPSFQGISSKNRSTESWPWVEKYRPSSLNDLIAHADIVATLNRLIDSQKMPHLLF
YGPPGTGKTSMMLAAARRLYGNNYQSMVLELNASDDRGINVVRDQIKEFAGTKKLFSDGI
KLIILDEADAMTNDAQFALRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFSPLEE
HQVRDRVEHIAKLENVAMTADGFQAVLRLGGGDMRRILNILQATSMAHDEVNESNVYLCT
GNPLPADMTALCNWLWTAPFEESVQQCMAMQLQKGYATTDILQHVYQNTNELELPPAARM
YVYDQLAHLEHRLCSGTSETLQLISLVAIFVRARELISAA
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggacgccaaggccgaccccagcttccagggcatctcgtccaagaaccgctcgaccgag
tcgtggccatgggtcgagaagtaccggccgtcgtccttgaacgacctcatcgcccacgct
gacatcgtcgcgacgctcaaccggctcatcgactcgcagaagatgccccatctgctcttc
tacgggccgccgggcacgggcaagacgtcgatgatgcttgccgccgcccgccgcctctat
ggcaacaactaccagtcgatggtgctcgagctcaacgcatccgacgaccgtggcatcaat
gtcgtgcgcgatcagatcaaagagttcgccggcacgaagaagctcttctctgatggcatc
aagctcatcatcctcgatgaagccgatgccatgaccaacgatgcgcagtttgcgctgcgt
cgcgtcattgaaaagtacaccaaaaacgcccgcttctgcctcatctgcaactacgtgagc
aagatcatccccgcgctgcagtctcgctgcacgcgcttccgcttctcgccgctcgaggaa
caccaagtccgtgaccgcgtcgagcacattgccaagctcgaaaatgtggcgatgaccgcc
gacggattccaagccgtgctgcgccttggcggtggcgacatgcggcgcatcctcaacatc
ctccaggccacgtccatggcccacgacgaagtgaacgaatcaaacgtgtatctctgcacg
ggcaacccgctccccgccgacatgacagcgctctgcaactggctatggactgcgccgttt
gaggagagcgtgcagcagtgcatggcgatgcagctccagaaagggtatgcaaccacggac
attctgcagcacgtctatcagaacacgaacgagctcgagctgccgccggccgcgcgcatg
tacgtctacgaccagctcgcgcacctcgaacaccgactctgttctgggacgtccgagacg
ctgcagctcatttcgcttgtcgccatctttgtgcgtgcgcgggagctcatctcggccgcg
taa

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